Prediction of the mode of interaction between monoterpenes and the nitroreductase from Enterobacter cloacae by docking simulation. - Sako Mirzaie; Fatemeh Rafii; Katsuaki Yasunaga; Kunie Yoshunaga; Zargham Sepehrizadeh; Shinji Kanno; Yu Tonegawa; Ahmad Reza Shahverdi (Comput. Biol. Medicine, 2012)

Structure-based virtual screening to identify the beta-lactamase CTX-M-9 inhibitors: An in silico effort to overcome antibiotic resistance in E. coli. - Kambiz Davari; Jamileh Nowroozi; Farzaneh Hosseini; Abbas Akhavan Sepahy; Sako Mirzaie (Comput. Biol. Chem., 2017)

Identification of novel inhibitor against endonuclease subunit of Influenza pH1N1 polymerase: A combined molecular docking, molecular dynamics, MMPBSA, QMMM and ADME studies to combat influenza A viruses. - Seyed Sajad Mohseni; Fariborz Nasri; Kambiz Davari; Sako Mirzaie; Atousa Moradzadegan; Fatemeh Abdi; Farhad Farzaneh (Comput. Biol. Chem., 2018)

Structure-based virtual screening, molecular docking and dynamics studies of natural product and classical inhibitors against human dihydrofolate reductase. - Elnaz Hosseininezhadian Koushki; Solmaz Abolghasemi; Adriano Mollica; Mojtaba Aghaeepoor; Seyedeh Sara Moosavi; Chiako Farshadfar; Bayazid Hasanpour; Babisandz Feyzi; Fatemeh Abdi; Sako Mirzaie (Netw. Model. Anal. Health Informatics Bioinform., 2020)