Volume-based solvation models out-perform area-based models in combined studies of wild-type and mutated protein-protein interfaces. - Salim Bougouffa; Jim Warwicker (BMC Bioinform., 2008)

SitesIdentify: a protein functional site prediction tool. - Tracey Bray; Pedro Chan; Salim Bougouffa; Richard B. Greaves; Andrew J. Doig; Jim Warwicker (BMC Bioinform., 2009)

DEOP: a database on osmoprotectants and associated pathways. - Salim Bougouffa; Aleksandar Radovanovic; Magbubah Essack; Vladimir B. Bajic (Database J. Biol. Databases Curation, 2014)

DESM: portal for microbial knowledge exploration systems. - Adil Salhi; Magbubah Essack; Aleksandar Radovanovic; Benoit Marchand; Salim Bougouffa; André Antunes 001; Marta Filipa Simões; Feras F. Lafi; Olaa A. Motwalli; Ameerah Bokhari; Tariq Malas; Soha Al Amoudi; et al. (Nucleic Acids Res., 2016)

bTSSfinder: a novel tool for the prediction of promoters in cyanobacteria and Escherichia coli. - Ilham A. Shahmuradov; Rozaimi Mohamad Razali; Salim Bougouffa; Aleksandar Radovanovic; Vladimir B. Bajic (Bioinform., 2017)

Toward Capturing Genetic Epistasis From Multivariate Genome-Wide Association Studies Using Mixed-Precision Kernel Ridge Regression. - Hatem Ltaief; Rabab Alomairy; Qinglei Cao; Jie Ren; Lotfi Slim; Thorsten Kurth; Benedikt Dorschner; Salim Bougouffa; Rached Abdelkhalak; David E. Keyes (SC, 2024)