Toward more realistic drug-target interaction predictions. - Tapio Pahikkala; Antti Airola; Sami Pietilä; Sushil Kumar Shakyawar; Agnieszka Szwajda; Jing Tang 002; Tero Aittokallio (Briefings Bioinform., 2015)

PhosPiR: an automated phosphoproteomic pipeline in R. - Ye Hong; Dani Flinkman; Tomi Suomi; Sami Pietilä; Peter James; Eleanor Coffey; Laura L. Elo (Briefings Bioinform., 2022)

Correction to: PhosPiR: an automated phosphoproteomic pipeline in R. - Ye Hong; Dani Flinkman; Tomi Suomi; Sami Pietilä; Peter James; Eleanor Coffey; Laura L. Elo (Briefings Bioinform., 2022)

Adaptive sequence alignment for metagenomic data analysis. - Sami Pietilä; Tomi Suomi; Niklas Paulin; Asta Laiho; Yannes S. Sclivagnotis; Laura L. Elo (Comput. Biol. Medicine, 2025)