ONYX: An Architecture for Planning in Uncertain Environments. - Curtis P. Langlotz; Lawrence M. Fagan; Samson W. Tu; John Williams; Branimir Sikic (IJCAI, 1985)

Episodic Skeletal-Plan Refinement Based on Temporal Data. - Samson W. Tu; Michael G. Kahn; Mark A. Musen; Jay C. Ferguson; Edward H. Shortliffe; Lawrence M. Fagan (Commun. ACM, 1989)

Problem-Solving Models for Generation of Task-Specific Knowledge-Acquisition Tools. - Mark A. Musen; Samson W. Tu (AIFIPP, 1992)

A multiple-method knowledge-acquisition shell for the automatic generation of knowledge-acquisition tools. - Angel R. Puerta; John W. Egar; Samson W. Tu; Mark A. Musen (Knowl. Acquis., 1992)

Knowledge acquisition for temporal-abstraction mechanisms. - Yuval Shahar; Samson W. Tu; Mark A. Musen (Knowl. Acquis., 1992)

A problem-solving model for episodic skeletal-plan refinement. - Samson W. Tu; Yuval Shahar; John Dawes; James Winkles; Angel R. Puerta; Mark A. Musen (Knowl. Acquis., 1992)

Modeling tasks with mechanisms. - Angel R. Puerta; Samson W. Tu; Mark A. Musen (Int. J. Intell. Syst., 1993)

Mapping domains to methods in support of reuse. - John H. Gennari; Samson W. Tu; Thomas E. Rothenfluh; Mark A. Musen (Int. J. Hum. Comput. Stud., 1994)

A Component-Based Architecture for Automation of Protocol-Directed Therapy. - Mark A. Musen; Samson W. Tu; Amar K. Das; Yuval Shahar (AIME, 1995)

Task Modeling with Reusable Problem-Solving Methods. - Henrik Eriksson; Yuval Shahar; Samson W. Tu; Angel R. Puerta; Mark A. Musen (Artif. Intell., 1995)

Ontology-based configuration of problem-solving methods and generation of knowledge-acquisition tools: application of PROTEGE-II to protocol-based decision support. - Samson W. Tu; Henrik Eriksson; John H. Gennari; Yuval Shahar; Mark A. Musen (Artif. Intell. Medicine, 1995)

Reusable ontologies, knowledge-acquisition tools, and performance systems: PROTÉGÉ-II solutions to Sisyphus-2. - Thomas E. Rothenfluh; John H. Gennari; Henrik Eriksson; Angel R. Puerta; Samson W. Tu; Mark A. Musen (Int. J. Hum. Comput. Stud., 1996)

Synthesis of Research: EON: A Component-Based Approach to Automation of Protocol-Directed Therapy. - Mark A. Musen; Samson W. Tu; Amar K. Das; Yuval Shahar (J. Am. Medical Informatics Assoc., 1996)

Domain Modeling with Integrated Ontologies: Principles for Reconciliation and Reuse. - Aneel A. Advani; Samson W. Tu; Mark A. Musen (AMIA, 1997)

Theater-Style Demonstration: EON: CORBA-Based Middleware for Automation of Protocol-Directed Therapy. - Mark A. Musen; Samson W. Tu; Aneel A. Advani; Amar K. Das; Zaki Hasan; John H. Nguyen; Yuval Shahar (AMIA, 1997)

A temporal database mediator for protocol-based decision support. - John H. Nguyen; Yuval Shahar; Samson W. Tu; Amar K. Das; Mark A. Musen (AMIA, 1997)

A declarative explanation framework that uses a collection of visualization agents. - Ravi D. Shankar; Samson W. Tu; Mark A. Musen (AMIA, 1998)

Episodic refinement of episodic skeletal-plan refinement. - Samson W. Tu; Mark A. Musen (Int. J. Hum. Comput. Stud., 1998)

Research Paper: The GuideLine Interchange Format: A Model for Representing Guidelines. - Lucila Ohno-Machado; John H. Gennari; Shawn N. Murphy; Nilesh L. Jain; Samson W. Tu; Diane E. Oliver; Edward Pattison-Gordon; Robert A. Greenes; Edward H. Shortliffe; G. Octo Barnett (J. Am. Medical Informatics Assoc., 1998)

Integrating a modern knowledge-based system architecture with a legacy VA database: the ATHENA and EON projects at Stanford. - Aneel A. Advani; Samson W. Tu; Martin J. O'Connor; Robert W. Coleman; Mary K. Goldstein; Mark A. Musen (AMIA, 1999)

EON 2.0: Enhanced Middleware for Automation of Protocol-Directed Therapy. - Mark A. Musen; Samson W. Tu; Ravi D. Shankar; Martin J. O'Connor; Aneel A. Advani (AMIA, 1999)

Applying temporal joins to clinical databases. - Martin J. O'Connor; Samson W. Tu; Mark A. Musen (AMIA, 1999)

The PRODIGY Knowledge Architecture Requirements for Chronic Disease Management in Primary Care. - Bob Sugden; Ian N. Purves; Nick Booth; Peter D. Johnson 001; Samson W. Tu (AMIA, 1999)

A flexible approach to guideline modeling. - Samson W. Tu; Mark A. Musen (AMIA, 1999)

Integration of Temporal Reasoning and Temporal-Data Maintenance into a Reusable Database Mediator to Answer Abstract, Time-Oriented Queries: The Tzolkin System. - John H. Nguyen; Yuval Shahar; Samson W. Tu; Amar K. Das; Mark A. Musen (J. Intell. Inf. Syst., 1999)

Guideline classification to assist modeling, authoring, implementation and retrieval. - Elmer V. Bernstam; Nachman Ash; Mor Peleg; Samson W. Tu; Aziz A. Boxwala; Peter Mork; Edward H. Shortliffe; Robert A. Greenes (AMIA, 2000)

Implementing clinical practice guidelines while taking account of changing evidence: ATHENA DSS, an easily modifiable decision-support system for managing hypertension in primary care. - Mary K. Goldstein; Brian B. Hoffman; Robert W. Coleman; Mark A. Musen; Samson W. Tu; Aneel A. Advani; Ravi D. Shankar; Martin J. O'Connor (AMIA, 2000)

Using scenarios in chronic disease management guidelines for primary care. - Peter D. Johnson 001; Samson W. Tu; Nick Booth; Bob Sugden; Ian N. Purves (AMIA, 2000)

Representation of Nursing Guidelines Using the EON Guideline Model. - Zhen Lin; Samson W. Tu; Mark A. Musen (AMIA, 2000)

Representation of temporal indeterminacy in clinical databases. - Martin J. O'Connor; Samson W. Tu; Mark A. Musen (AMIA, 2000)

GLIF3: the evolution of a guideline representation format. - Mor Peleg; Aziz A. Boxwala; Omolola Ogunyemi; Qing T. Zeng; Samson W. Tu; Ronilda Lacson; Elmer V. Bernstam; Nachman Ash; Peter Mork; Lucila Ohno-Machado; Edward H. Shortliffe; Robert A. Greenes (AMIA, 2000)

Explanations for a Hypertension Decision Support System. - Ravi D. Shankar; Samson W. Tu; Mary K. Goldstein; Mark A. Musen (AMIA, 2000)

From guideline modeling to guideline execution: defining guideline-based decision-support services. - Samson W. Tu; Mark A. Musen (AMIA, 2000)

A Three-layer Domain Ontology for Guideline Representation and Sharing. - Qing T. Zeng; Samson W. Tu; Aziz A. Boxwala; Mor Peleg; Robert A. Greenes; Edward H. Shortliffe (AMIA, 2000)

Representation Formalisms and Computational Methods for Modeling Guideline-Based Patient Care. - Samson W. Tu; Mark A. Musen (EWGLP, 2000)

Interface of Inference Models with Concept and Medical Record Models. - Alan L. Rector; Peter D. Johnson 001; Samson W. Tu; Chris Wroe; Jeremy Rogers (AIME, 2001)

Preliminary Evaluation of a Guideline Classification System. - Elmer V. Bernstam; Nachman Ash; Mor Peleg; Samson W. Tu; Edward H. Shortliffe; Robert A. Greenes (AMIA, 2001)

A virtual medical record for guideline-based decision support. - Peter D. Johnson 001; Samson W. Tu; Mark A. Musen; Ian N. Purves (AMIA, 2001)

A Client-Server Framework for Deploying a Decision-support System in a Resource-constrained Environment. - Martin J. O'Connor; Ravi D. Shankar; Samson W. Tu; Aneel A. Advani; Mary K. Goldstein; Robert W. Coleman; Mark A. Musen (AMIA, 2001)

Using features of Arden Syntax with object-oriented medical data models for guideline modeling. - Mor Peleg; Omolola Ogunyemi; Samson W. Tu; Aziz A. Boxwala; Qing T. Zeng; Robert A. Greenes; Edward H. Shortliffe (AMIA, 2001)

Integration of textual guideline documents with formal guideline knowledge bases. - Ravi D. Shankar; Samson W. Tu; Susana B. Martins; Lawrence M. Fagan; Mary K. Goldstein; Mark A. Musen (AMIA, 2001)

Sharable Computer-based Clinical Practice Guidelines: Rationale, Obstacles, Approaches, and Prospects. - Robert A. Greenes; Mor Peleg; Aziz A. Boxwala; Samson W. Tu; Vimla L. Patel; Edward H. Shortliffe (MedInfo, 2001)

Achieving Reuse of Computable Guideline Systems. - Peter D. Johnson 001; Samson W. Tu; Neill Jones (MedInfo, 2001)

RASTA: A Distributed Temporal Abstraction System to Facilitate Knowledge-Driven Monitoring of Clinical Databases. - Martin J. O'Connor; William E. Grosso; Samson W. Tu; Mark A. Musen (MedInfo, 2001)

Handling Expressiveness and Comprehensibility Requirements in GLIF3. - Mor Peleg; Aziz A. Boxwala; Samson W. Tu; Robert A. Greenes; Edward H. Shortliffe; Vimla L. Patel (MedInfo, 2001)

Building an Explanation Function for a Hypertension Decision-Support System. - Ravi D. Shankar; Susana B. Martins; Samson W. Tu; Mary K. Goldstein; Mark A. Musen (MedInfo, 2001)

Modeling Data and Knowledge in the EON Guideline Architecture. - Samson W. Tu; Mark A. Musen (MedInfo, 2001)

Representation of Clinical Practice Guidelines for Computer-Based Implementations. - Dongwen Wang; Mor Peleg; Samson W. Tu; Edward H. Shortliffe; Robert A. Greenes (MedInfo, 2001)

Toward a Representation Format for Sharable Clinical Guidelines. - Aziz A. Boxwala; Samson W. Tu; Mor Peleg; Qing T. Zeng; Omolola Ogunyemi; Robert A. Greenes; Edward H. Shortliffe; Vimla L. Patel (J. Biomed. Informatics, 2001)

Sharable Representation of Clinical Guidelines in GLIF: Relationship to the Arden Syntax. - Mor Peleg; Aziz A. Boxwala; Elmer V. Bernstam; Samson W. Tu; Robert A. Greenes; Edward H. Shortliffe (J. Biomed. Informatics, 2001)

The helpful patient record system: problem oriented and knowledge based. - Elisabeth Bayegan; Samson W. Tu (AMIA, 2002)

Standards-based Sharable Active Guideline Environment (SAGE): A Project to Develop a Universal Framework for Encoding and Disseminating Electronic Clinical Practice Guidelines. - Nick Beard; James R. Campbell 001; Stanley M. Huff; Mauricio Leon; James G. Mansfield; Eric Mays; James C. McClay; David N. Mohr; Mark A. Musen; David O'Brien; Roberto A. Rocha; Anne Saulovich; et al. (AMIA, 2002)

Knowledge-based bioterrorism surveillance. - David L. Buckeridge; Justin Graham; Martin J. O'Connor; Michael Choy; Samson W. Tu; Mark A. Musen (AMIA, 2002)

The Chronus II temporal database mediator. - Martin J. O'Connor; Samson W. Tu; Mark A. Musen (AMIA, 2002)

Support for guideline development through error classification and constraint checking. - Mor Peleg; Vimla L. Patel; Vincenza Snow; Samson W. Tu; Christel Mottur-Pilson; Edward H. Shortliffe; Robert A. Greenes (AMIA, 2002)

Use of Protégé-2000 to Encode Clinical Guidelines. - Ravi D. Shankar; Samson W. Tu; Mark A. Musen (AMIA, 2002)

A Typology for Modeling Processes in Clinical Guidelines and Protocols. - Samson W. Tu; Peter D. Johnson 001; Mark A. Musen (AMIA, 2002)

Representation primitives, process models and patient data in computer-interpretable clinical practice guidelines: : A literature review of guideline representation models. - Dongwen Wang; Mor Peleg; Samson W. Tu; Aziz A. Boxwala; Robert A. Greenes; Vimla L. Patel; Edward H. Shortliffe (Int. J. Medical Informatics, 2002)

Patient Safety in Guideline-Based Decision Support for Hypertension Management: ATHENA DSS. - Mary K. Goldstein; Brian B. Hoffman; Robert W. Coleman; Samson W. Tu; Ravi D. Shankar; Martin J. O'Connor; Susana B. Martins; Aneel A. Advani; Mark A. Musen (J. Am. Medical Informatics Assoc., 2002)

Protégé-2000: An Open-Source Ontology-Development and Knowledge-Acquisition Environment: AMIA 2003 Open Source Expo. - Natalya Fridman Noy; Monica Crubézy; Ray W. Fergerson; Holger Knublauch; Samson W. Tu; Jennifer Vendetti; Mark A. Musen (AMIA, 2003)

A Knowledge-Acquisition Wizard to Encode Guidelines. - Ravi D. Shankar; Samson W. Tu; Mark A. Musen (AMIA, 2003)

The Structure of Guideline Recommendations: A Synthesis. - Samson W. Tu; James R. Campbell 001; Mark A. Musen (AMIA, 2003)

GESDOR - A Generic Execution Model for Sharing of Computer-Interpretable Clinical Practice Guidelines. - Dongwen Wang; Mor Peleg; Davis Bu; Michael N. Cantor; Giora Landesberg; Eitan Lunenfeld; Samson W. Tu; Gail E. Kaiser; George Hripcsak; Vimla L. Patel; Edward H. Shortliffe (AMIA, 2003)

The evolution of Protégé: an environment for knowledge-based systems development. - John H. Gennari; Mark A. Musen; Ray W. Fergerson; William E. Grosso; Monica Crubézy; Henrik Eriksson; Natalya Fridman Noy; Samson W. Tu (Int. J. Hum. Comput. Stud., 2003)

Research Paper: Comparing Computer-interpretable Guideline Models: A Case-study Approach. - Mor Peleg; Samson W. Tu; Jonathan Bury; Paolo Ciccarese; John Fox 001; Robert A. Greenes; Richard W. Hall; Peter D. Johnson 001; Neill Jones; Anand Kumar; Silvia Miksch; Silvana Quaglini; et al. (J. Am. Medical Informatics Assoc., 2003)

The SAGE Guideline Modeling: Motivation and Methodology. - Samson W. Tu; James R. Campbell 001; Mark A. Musen (CGP, 2004)

Detailed Clinical Models for Sharable, Executable Guidelines. - Craig G. Parker; Roberto A. Rocha; James R. Campbell 001; Samson W. Tu; Stanley M. Huff (MedInfo, 2004)

Modeling and Analyzing Biomedical Processes using Workflow/Petri Net Models and Tools. - Mor Peleg; Samson W. Tu; Abhijit Manindroo; Russ B. Altman (MedInfo, 2004)

Executing Clinical Practice Guidelines using the SAGE Execution Engine. - Prabhu Ram; David Berg; Samson W. Tu; Guy Mansfield; Qin Ye; Robert M. Abarbanel; Nick Beard (MedInfo, 2004)

Modeling Guidelines for Integration into Clinical Workflow. - Samson W. Tu; Mark A. Musen; Ravi D. Shankar; James R. Campbell 001; Karen M. Hrabak; James C. McClay; Stanley M. Huff; Robert C. McClure; Craig G. Parker; Roberto A. Rocha; Robert M. Abarbanel; Nick Beard; et al. (MedInfo, 2004)

Application of Information Technology: Translating Research into Practice: Organizational Issues in Implementing Automated Decision Support for Hypertension in Three Medical Centers. - Mary K. Goldstein; Robert W. Coleman; Samson W. Tu; Ravi D. Shankar; Martin J. O'Connor; Mark A. Musen; Susana B. Martins; Philip W. Lavori; Michael G. Shlipak; Eugene Oddone; Aneel A. Advani; Parisa Gholami; et al. (J. Am. Medical Informatics Assoc., 2004)

Review Paper: The InterMed Approach to Sharable Computer-interpretable Guidelines: A Review. - Mor Peleg; Aziz A. Boxwala; Samson W. Tu; Qing T. Zeng; Omolola Ogunyemi; Dongwen Wang; Vimla L. Patel; Robert A. Greenes; Edward H. Shortliffe (J. Am. Medical Informatics Assoc., 2004)

GLIF3: a representation format for sharable computer-interpretable clinical practice guidelines. - Aziz A. Boxwala; Mor Peleg; Samson W. Tu; Omolola Ogunyemi; Qing T. Zeng; Dongwen Wang; Vimla L. Patel; Robert A. Greenes; Edward H. Shortliffe (J. Biomed. Informatics, 2004)

Design and implementation of the GLIF3 guideline execution engine. - Dongwen Wang; Mor Peleg; Samson W. Tu; Aziz A. Boxwala; Omolola Ogunyemi; Qing T. Zeng; Robert A. Greenes; Vimla L. Patel; Edward H. Shortliffe (J. Biomed. Informatics, 2004)

Semantic Clinical Guideline Documents. - Henrik Eriksson; Samson W. Tu; Mark A. Musen (AMIA, 2005)

Supporting Rule System Interoperability on the Semantic Web with SWRL. - Martin J. O'Connor; Holger Knublauch; Samson W. Tu; Benjamin N. Grosof; Mike Dean; William E. Grosso; Mark A. Musen (ISWC, 2005)

protégé as a vehicle for developing medical terminological systems. - Ameen Abu-Hanna; Ronald Cornet; Nicolette de Keizer; Monica Crubézy; Samson W. Tu (Int. J. Hum. Comput. Stud., 2005)

Medical Arguments in an Automated Health Care System. - Ravi D. Shankar; Samson W. Tu; Mark A. Musen (AAAI Spring Symposium: Argumentation for Consumers of Healthcare, 2006)

Partnerships in Innovation: How We Accomplished the Objectives of the SAGE Project. - Robert M. Abarbanel; David Berg; James R. Campbell 001; Julie Glasgow; Karen M. Hrabak; James G. Mansfield; James C. McClay; Robert C. McClure; Mark A. Nyman; Craig G. Parker; Sidna M. Scheitel; Samson W. Tu; et al. (AMIA, 2006)

Offline Testing of the ATHENA Hypertension Decision Support System Knowledge Base to Improve the Accuracy of Recommendations. - Susana B. Martins; Steve Lai; Samson W. Tu; Ravi D. Shankar; S. N. Hastings; Brian B. Hoffman; Naja DiPilla; Mary K. Goldstein (AMIA, 2006)

Structuring Order Sets for Interoperable Distribution. - James C. McClay; James R. Campbell 001; Craig G. Parker; Karen M. Hrabak; Samson W. Tu; Robert M. Abarbanel (AMIA, 2006)

Use of Declarative Statements in Creating and Maintaining Computer-Interpretable Knowledge Bases for Guideline-Based Care. - Samson W. Tu; Karen M. Hrabak; James R. Campbell 001; Julie Glasgow; Mark A. Nyman; Robert C. McClure; James C. McClay; Robert M. Abarbanel; James G. Mansfield; Susana B. Martins; Mary K. Goldstein; Mark A. Musen (AMIA, 2006)

Using Semantic Web Technologies for Knowledge-Driven Querying of Biomedical Data. - Martin J. O'Connor; Ravi D. Shankar; Samson W. Tu; Csongor Nyulas; Dave Parrish; Mark A. Musen; Amar K. Das (AIME, 2007)

Mining Hospital Data to Learn SDA* Clinical Algorithms. - David Riaño 001; Joan Albert López-Vallverdú; Samson W. Tu (K4CARE, 2007)

Document-Oriented Views of Guideline Knowledge Bases. - Samson W. Tu; Shantha Condamoor; Tim Mather; Richard W. Hall; Neill Jones; Mark A. Musen (AIME, 2007)

Guideline Models, Process Specification, and Workflow. - Samson W. Tu (Business Process Management Workshops, 2007)

Creating Interoperable Guidelines: Requirements of Vocabulary Standards in Immunization Decision Support. - Karen M. Hrabak; James R. Campbell 001; Samson W. Tu; Robert C. McClure; Robert Weida (MedInfo, 2007)

Efficiently Querying Relational Databases Using OWL and SWRL. - Martin J. O'Connor; Ravi D. Shankar; Samson W. Tu; Csongor Nyulas; Amar K. Das; Mark A. Musen (RR, 2007)

Querying the Semantic Web with SWRL. - Martin J. O'Connor; Samson W. Tu; Csongor Nyulas; Amar K. Das; Mark A. Musen (RuleML, 2007)

Synthesis of Research Paper: The SAGE Guideline Model: Achievements and Overview. - Samson W. Tu; James R. Campbell 001; Julie Glasgow; Mark A. Nyman; Robert C. McClure; James C. McClay; Craig G. Parker; Karen M. Hrabak; David Berg; Tony Weida; James G. Mansfield; Mark A. Musen; et al. (J. Am. Medical Informatics Assoc., 2007)

Developing a Web-Based Application using OWL and SWRL. - Martin J. O'Connor; Ravi D. Shankar; Csongor Nyulas; Samson W. Tu; Amar K. Das (AAAI Spring Symposium: AI Meets Business Rules and Process Management, 2008)

Predicting Outbreak Detection in Public Health Surveillance: Quantitative Analysis to Enable Evidence-Based Method Selection. - David L. Buckeridge; Anna Okhmatovskaia; Samson W. Tu; Martin J. O'Connor; Csongor Nyulas; Mark A. Musen (AMIA, 2008)

Using an Integrated Ontology and Information Model for Querying and Reasoning about Phenotypes: The Case of Autism. - Samson W. Tu; Lakshika Tennakoon; Martin J. O'Connor; Ravi D. Shankar; Amar K. Das (AMIA, 2008)

An Ontology-Driven Framework for Deploying JADE Agent Systems. - Csongor Nyulas; Martin J. O'Connor; Samson W. Tu; David L. Buckeridge; Anna Okhmatovskaia; Mark A. Musen (IAT, 2008)

Supporting Collaborative Ontology Development in Protégé. - Tania Tudorache; Natalya Fridman Noy; Samson W. Tu; Mark A. Musen (ISWC, 2008)

Model Formulation: Understanding Detection Performance in Public Health Surveillance: Modeling Aberrancy-detection Algorithms. - David L. Buckeridge; Anna Okhmatovskaia; Samson W. Tu; Martin J. O'Connor; Csongor Nyulas; Mark A. Musen (J. Am. Medical Informatics Assoc., 2008)

A Bayesian Network Model for Analysis of Detection Performance in Surveillance Systems. - Masoumeh T. Izadi; David L. Buckeridge; Anna Okhmatovskaia; Samson W. Tu; Martin J. O'Connor; Csongor Nyulas; Mark A. Musen (AMIA, 2009)

Extracting Cancer Quality Indicators from Electronic Medical Records: Evaluation of an Ontology-Based Virtual Medical Record Approach. - Wei-Nchih Lee; Samson W. Tu; Amar K. Das (AMIA, 2009)

Ontology driven data integration for autism research. - Lynn Young; Samson W. Tu; Lakshika Tennakoon; David Vismer; Vadim Astakhov; Amarnath Gupta; Jeffrey S. Grethe; Maryann E. Martone; Amar K. Das; Matthew J. McAuliffe (CBMS, 2009)

Software-engineering challenges of building and deploying reusable problem solvers. - Martin J. O'Connor; Csongor Nyulas; Samson W. Tu; David L. Buckeridge; Anna Okhmatovskaia; Mark A. Musen (Artif. Intell. Eng. Des. Anal. Manuf., 2009)

Design patterns for clinical guidelines. - Mor Peleg; Samson W. Tu (Artif. Intell. Medicine, 2009)

A Typology for Modeling Processes in Clinical Guidelines and Protocols. - Samson W. Tu; Mark A. Musen (SUComS, 2010)

Formal representation of eligibility criteria: A literature review. - Chunhua Weng; Samson W. Tu; Ida Sim; Rachel L. Richesson (J. Biomed. Informatics, 2010)

Reasoning with Effects of Clinical Guideline Actions Using OWL: AL Amyloidosis as a Case Study. - Mor Peleg; Samson W. Tu; Giorgio Leonardi; Silvana Quaglini; Paola Russo; Giovanni Palladini; Giampaolo Merlini (KR4HC, 2011)

Web-Based Querying and Temporal Visualization of Longitudinal Clinical Data. - Amanda Richards; Martin J. O'Connor; Susana B. Martins; Michael Uehara-Bingen; Samson W. Tu; Amar K. Das (AIME, 2011)

SWEETInfo: a Web-Based System for Visualizing and Querying Temporal Data. - Martin J. O'Connor; Amanda Richards; Susana B. Martins; Mike Bingen; Samson W. Tu; Amar K. Das (RuleML America (2), 2011)

Web-based Exploration of Temporal Data in Biomedicine. - Martin J. O'Connor; Mike Bingen; Amanda Richards; Samson W. Tu; Amar K. Das (WEBIST, 2011)

A practical method for transforming free-text eligibility criteria into computable criteria. - Samson W. Tu; Mor Peleg; Simona Carini; Michael Bobak; Jessica Ross; Daniel L. Rubin; Ida Sim (J. Biomed. Informatics, 2011)

Application of Preference-Oriented Decision Making to Multimorbidity for Computerized Decision Support: Decision Analysis and Analytic Hierarchy. - Joshua Goldner; Samson W. Tu; Mary K. Goldstein; Susana B. Martins; Pamela Kum; Csongor Nyulas; Mark A. Musen (AMIA, 2012)

The Implementer's Workbench: Incorporating Site-Specific Factors into Clinical Decision Support Rules Using an ArdenML Framework. - Peter J. Haug; Nathan C. Hulse; David Yauch; Emory Fry; Samson W. Tu; Mary K. Goldstein; Pamela Kum; Robert A. Greenes (AMIA, 2012)

Deriving an Abstraction Network to Support Quality Assurance in OCRe. - Christopher Ochs; Ankur Agrawal; Yehoshua Perl; Michael Halper; Samson W. Tu; Simona Carini; Ida Sim; Natalya Fridman Noy; Mark A. Musen; James Geller (AMIA, 2012)

Ontology-Based Federated Data Access to Human Studies Information. - Ida Sim; Simona Carini; Samson W. Tu; Landon Detwiler; James F. Brinkley; Shamin Mollah; Karl Burke; Harold P. Lehmann; Swati Chakraborty; Knut M. Wittkowski; Brad Pollock; Thomas Johnson; et al. (AMIA, 2012)

Development of a Taxonomy of Setting-Specific Factors for Adaptation of Clinical Decision Support Rules. - David Yauch; Pamela Kum; Samson W. Tu; Peter J. Haug; Nathan C. Hulse; Emory Fry; Robert A. Greenes; Mary K. Goldstein (AMIA, 2012)

The Template Instance Pattern. - Csongor Nyulas; Tania Tudorache; Samson W. Tu (WOP, 2012)

Experiences with Multilingual Modeling in the Development of the International Classification of Traditional Medicine Ontology. - Csongor Nyulas; Tania Tudorache; Samson W. Tu; Mark A. Musen (MSW, 2012)

Creating a MRSA Ontology to Support Categorization of MRSA Infections. - Susana B. Martins; Samson W. Tu; Richard Martinello; Michael Rubin; Philip Foulis; Stephen Luther; Tyler Forbush; Matthew Scotch; Brad Doebbelling; Mary K. Goldstein (AMIA, 2013)

Automating Performance Measures and Clinical Practice Guidelines: Differences and Complementarities. - Mary K. Goldstein; Samson W. Tu; Susana B. Martins; Connie Oshiro; Kaeli Yuen; Tammy S. Hwang; Dan Y. Wang; Amy Furman; Michael Ashcraft; Paul Heidenreich (AMIA, 2014)

Encoding Performance Measures For Automated Quality Assessment. - Tammy S. Hwang; Susana B. Martins; Samson W. Tu; Dan Y. Wang; Paul Heidenreich; Mary K. Goldstein (AMIA, 2014)

Crowdsourcing ICD-11 Sanctioning Rules. - Vincent Lou; Samson W. Tu; Csongor Nyulas; Tania Tudorache; Robert J. G. Chalmers; Mark A. Musen (AMIA, 2014)

The Ontology of Clinical Research (OCRe): An informatics foundation for the science of clinical research. - Ida Sim; Samson W. Tu; Simona Carini; Harold P. Lehmann; Brad H. Pollock; Mor Peleg; Knut M. Wittkowski (J. Biomed. Informatics, 2014)

Automating Guidelines for Clinical Decision Support (CDS): A Categorization of Knowledge Engineering and Implementation Decisions. - Mary K. Goldstein; Samson W. Tu; Connie Oshiro; Susana B. Martins; Dan Y. Wang; Amy Furman; Michael Ashcraft; Jonathan Mendoza; Paul Heidenreich (AMIA, 2015)

A Method to Compare ICF and SNOMED CT for Coverage of U.S. Social Security Administration's Disability Listing Criteria. - Samson W. Tu; Csongor Nyulas; Tania Tudorache; Mark A. Musen (AMIA, 2015)

Integrating an Externally Developed Clinical Decision Support (CDS) System with an Existing Electronic Health Record (EHR) System at VA. - Samson W. Tu; Kaeli Yuen; Connie Oshiro; Susana B. Martins; Ignacio Valdes; George O. Welch; Paul Heidenreich; Mary K. Goldstein (AMIA, 2015)

Using a Clinical Knowledge Base to Assess Comorbidity Interrelatedness Among Patients with Multiple Chronic Conditions. - Donna M. Zulman; Susana B. Martins; Yan Liu; Samson W. Tu; Brian B. Hoffman; Steven M. Asch; Mary K. Goldstein (AMIA, 2015)

OWL-based form generation and structured data acquisition. - Rafael S. Gonçalves 001; Csongor I. Nyulas; Samson W. Tu; Mark A. Musen (ICBO, 2015)

Structured data acquisition with ontology-based web forms. - Rafael S. Gonçalves 001; Samson W. Tu; Csongor I. Nyulas; Michael J. Tierney; Mark A. Musen (ICBO, 2015)

Modeling and tools for supporting post-coordination in ICD-11. - Csongor I. Nyulas; Samson W. Tu; Tania Tudorache; Mark A. Musen (ICBO, 2015)

Summarizing and visualizing structural changes during the evolution of biomedical ontologies using a Diff Abstraction Network. - Christopher Ochs; Yehoshua Perl; James Geller; Melissa A. Haendel; Matthew H. Brush; Sivaram Arabandi; Samson W. Tu (J. Biomed. Informatics, 2015)

Automating Guidelines for Clinical Decision Support: Knowledge Engineering and Implementation. - Geoffrey J. Tso; Samson W. Tu; Connie Oshiro; Susana B. Martins; Michael Ashcraft; Kaeli Yuen; Dan Y. Wang; Amy Robinson; Paul Heidenreich; Mary K. Goldstein (AMIA, 2016)

Automating Performance Measures and Clinical Practice Guidelines: Differences and Complementarities. - Samson W. Tu; Susana B. Martins; Connie Oshiro; Kaeli Yuen; Dan Y. Wang; Amy Robinson; Michael Ashcraft; Paul Heidenreich; Mary K. Goldstein (AMIA, 2016)

Test Case Selection in Pre-Deployment Testing of Complex Clinical Decision Support Systems. - Geoffrey J. Tso; Kaeli Yuen; Susana B. Martins; Samson W. Tu; Michael Ashcraft; Paul Heidenreich; Brian B. Hoffman; Mary K. Goldstein (CRI, 2016)

High-Risk Drug-Drug Interactions Between Clinical Practice Guidelines for Management of Chronic Conditions. - Geoffrey J. Tso; Samson W. Tu; Mark A. Musen; Mary K. Goldstein (CRI, 2017)

An ontology-driven tool for structured data acquisition using Web forms. - Rafael S. Gonçalves 001; Samson W. Tu; Csongor I. Nyulas; Michael J. Tierney; Mark A. Musen (J. Biomed. Semant., 2017)

Use of ontology structure and Bayesian models to aid the crowdsourcing of ICD-11 sanctioning rules. - Yun Lou; Samson W. Tu; Csongor Nyulas; Tania Tudorache; Robert J. G. Chalmers; Mark A. Musen (J. Biomed. Informatics, 2017)

Goal-driven management of interacting clinical guidelines for multi-morbidity patients. - Alexandra Kogan; Samson W. Tu; Mor Peleg (AMIA, 2018)

Selecting Test Cases from the Electronic Health Record for Software Testing of Knowledge-Based Clinical Decision Support Systems. - Omar A. Usman; Connie Oshiro; Justin G. Chambers; Samson W. Tu; Susana B. Martins; Amy Robinson; Mary K. Goldstein (AMIA, 2018)

A Method for Goal-Oriented Guideline Modeling in PROforma and Its Preliminary Evaluation. - Mor Peleg; Alexandra Kogan; Samson W. Tu (KR4HC/ProHealth/TEAAM@AIME, 2019)

Detecting and mitigating clinical guideline interactions in multimorbidity patients using computer-interpretable guidelines and AEOLUS. - Alexandra Kogan; Mor Peleg; Samson W. Tu (AMIA, 2019)

GoCom - A Goal-oriented Methodology for Treatment of Patients with Multimorbidity and Its Preliminary Evaluation. - Alexandra Kogan; Mor Peleg; Samson W. Tu; Irit Hochberg; Natanel Khaitov; Raviv Allon (AMIA, 2020)

Toward a Harmonized WHO Family of International Classifications Content Model. - Samson W. Tu; Csongor Nyulas; Tania Tudorache; Mark A. Musen; Andrea Martinuzzi; Coen H. van Gool; Vincenzo Della Mea; Christopher G. Chute; Lucilla Frattura; Nicholas R. Hardiker; Huib ten Napel; Richard Madden; et al. (AMIA, 2020)

Towards a goal-oriented methodology for clinical-guideline-based management recommendations for patients with multimorbidity: GoCom and its preliminary evaluation. - Alexandra Kogan; Mor Peleg; Samson W. Tu; Raviv Allon; Natanel Khaitov; Irit Hochberg (J. Biomed. Informatics, 2020)

Towards a framework for comparing functionalities of multimorbidity clinical decision support: A literature-based feature set and benchmark cases. - Dympna O'Sullivan; William Van Woensel; Szymon Wilk; Samson W. Tu; Wojtek Michalowski; Samina Abidi; Marc Carrier; Ruth Edry; Irit Hochberg; Stephen P. Kingwell; Alexandra Kogan; Martin Michalowski; et al. (AMIA, 2021)

A Goal-Oriented Methodology for Treatment of Patients with Multimorbidity - Goal Comorbidities (GoCom) Proof-of-Concept Demonstration. - Alexandra Kogan; Mor Peleg; Samson W. Tu; Raviv Allon; Natanel Khaitov; Irit Hochberg (AIME, 2022)

Extending FHIR Timing Representation for Expressing Monitoring Recommendations. - Alexandra Kogan; Mor Peleg; Samson W. Tu (AMIA, 2022)

Structural Patterns in Chronic Disease Clinical Practice Guidelines Formalized for Clinical Decision Support. - Samson W. Tu; Tanya Podchiyska; Connie Oshiro; Susana B. Martins; Michael Ashcraft; Justin G. Chambers; Amy Robinson; Paul Heidenreich; Mary K. Goldstein (AMIA, 2022)

A community-of-practice-based evaluation methodology for knowledge intensive computational methods and its application to multimorbidity decision support. - William Van Woensel; Samson W. Tu; Wojtek Michalowski; Syed Sibte Raza Abidi; Samina Abidi; José Ramón Alonso 001; Alessio Bottrighi; Marc Carrier; Ruth Edry; Irit Hochberg; Malvika Rao; Stephen P. Kingwell; et al. (J. Biomed. Informatics, 2023)

Linking Health Terminologies: A Unified Approach to the WHO Family of International Classifications. - Samson W. Tu; Ann-Helene Almborg; Andrea Martinuzzi; Vincenzo Della Mea; Kathy L. Giannangelo; Christopher G. Chute; Cassandra Linton; Ronald Cornet; Can Celik; Robert Jakob (MIE, 2024)