BugSeq: a highly accurate cloud platform for long-read metagenomic analyses. - Jeremy Fan; Steven Huang; Samuel D. Chorlton (BMC Bioinform., 2021)

Ten common issues with reference sequence databases and how to mitigate them. - Samuel D. Chorlton (Frontiers Bioinform., 2024)

refMLST: reference-based multilocus sequence typing enables universal bacterial typing. - Mondher Khdhiri; Ella Thomas; Chanel de Smet; Priyanka Chandar; Induja Chandrakumar; Jean M. Davidson; Paul Anderson; Samuel D. Chorlton (BMC Bioinform., 2024)