The Database of Macromolecular Motions: new features added at the decade mark. - Samuel Flores; Nathaniel Echols; Duncan Milburn; Brandon Hespenheide; Kevin Keating; Jason Lu; Stephen Wells; Eric Z. Yu; Michael Thorpe; Mark Gerstein (Nucleic Acids Res., 2006)

FlexOracle: predicting flexible hinges by identification of stable domains. - Samuel Flores; Mark Gerstein (BMC Bioinform., 2007)

Hinge Atlas: relating protein sequence to sites of structural flexibility. - Samuel Flores; Long J. Lu; Julie Yang; Nicholas Carriero; Mark Gerstein (BMC Bioinform., 2007)

Session Introduction. - Samuel Flores; Julie Bernauer; Xuhui Huang; Ruhong Zhou; Seokmin Shin (Pacific Symposium on Biocomputing, 2010)

Predicting RNA Structure by Multiple Template Homology Modeling. - Samuel Flores; Yaqi Wan; Rick Russell; Russ B. Altman (Pacific Symposium on Biocomputing, 2010)

Structural insights into Pre-Translocation Ribosome Motions. - Samuel Coulbourn Flores; Russ B. Altman (Pacific Symposium on Biocomputing, 2011)

Predicting protein ligand binding motions with the Conformation Explorer. - Samuel Flores; Mark B. Gerstein (BMC Bioinform., 2011)

Fast Flexible Modeling of RNA Structure Using Internal Coordinates. - Samuel Coulbourn Flores; Michael A. Sherman; Christopher M. Bruns; Peter K. Eastman; Russ B. Altman (IEEE ACM Trans. Comput. Biol. Bioinform., 2011)

Multiscale modeling of macromolecular biosystems. - Samuel Flores; Julie Bernauer; Seokmin Shin; Ruhong Zhou; Xuhui Huang (Briefings Bioinform., 2012)

Insights into Diseases of Human Telomerase from Dynamical Modeling. - Samuel Coulbourn Flores; Georgeta Zemora; Christina Waldsich (Pacific Symposium on Biocomputing, 2013)

Phosphorylation by PINK1 Releases the UBL Domain and Initializes the Conformational Opening of the E3 Ubiquitin Ligase Parkin. - Thomas R. Caulfield; Fabienne C. Fiesel; Elisabeth L. Moussaud-Lamodière; Daniel F. A. R. Dourado; Samuel Flores; Wolfdieter Springer (PLoS Comput. Biol., 2014)

Developing a Scalable SNMP Monitor. - Krishna Bharadwaj; Samuel Flores; Joshua Rodriguez; Lance Long; G. Elisabeta Marai (IPDPS Workshops, 2016)

Combining flipped-classroom and spaced-repetition learning in a master-level bioinformatics course. - Gabriele Pozzati; Samuel Coulbourn Flores (PLoS Comput. Biol., 2025)