Ab initio computational modeling of long loops in G-protein coupled receptors. - Sandhya Kortagere; Amitava Roy; Ernest L. Mehler (J. Comput. Aided Mol. Des., 2006)

Development and application of hybrid structure based method for efficient screening of ligands binding to G-protein coupled receptors. - Sandhya Kortagere; William J. Welsh (J. Comput. Aided Mol. Des., 2006)

Challenges Predicting Ligand-Receptor Interactions of Promiscuous Proteins: The Nuclear Receptor PXR. - Sean Ekins; Sandhya Kortagere; Manisha Iyer; Erica J. Reschly; Markus A. Lill; Matthew R. Redinbo; Matthew D. Krasowski (PLoS Comput. Biol., 2009)

Structure-based Design of Novel Small-Molecule Inhibitors of Plasmodium falciparum. - Sandhya Kortagere; William J. Welsh; Joanne M. Morrisey; Thomas Daly; Ijeoma Ejigiri; Photini Sinnis; Akhil B. Vaidya; Lawrence W. Bergman (J. Chem. Inf. Model., 2010)

Rapid discovery of inhibitors of Toxoplasma gondii using hybrid structure-based computational approach. - Sandhya Kortagere; Ernest Mui; Rima McLeod; William J. Welsh (J. Comput. Aided Mol. Des., 2011)

Structure-Activity Relationships of a Novel Capsid Targeted Inhibitor of HIV-1 Replication. - Sandhya Kortagere; Jimmy P. Xu; Marie K. Mankowski; Roger G. Ptak; Simon Cocklin (J. Chem. Inf. Model., 2014)