An effective framework for reconstructing gene regulatory networks from genetical genomics data. - Robert J. Flassig; Sandra Heise; Kai Sundmacher; Steffen Klamt (Bioinform., 2013)

Reconstruction of large-scale regulatory networks based on perturbation graphs and transitive reduction: improved methods and their evaluation. - Andrea Pinna 003; Sandra Heise; Robert J. Flassig; Alberto de la Fuente; Steffen Klamt (BMC Syst. Biol., 2013)

TRaCE+: Ensemble inference of gene regulatory networks from transcriptional expression profiles of gene knock-out experiments. - S. M. Minhaz Ud-Dean; Sandra Heise; Steffen Klamt; Rudiyanto Gunawan (BMC Bioinform., 2016)

Designing Optimal Experiments to Discriminate Interaction Graph Models. - Sven Thiele; Sandra Heise; Wiebke Hessenkemper; Hannes Bongartz; Melissa Fensky; Fred Schaper; Steffen Klamt (IEEE ACM Trans. Comput. Biol. Bioinform., 2019)