Minerva: a light-weight, narrative image browser for multiplexed tissue images. - John Hoffer; Rumana Rashid; Jeremy Muhlich; Yu-An Chen; Douglas Russell; Juha Ruokonen; Robert Krüger; Hanspeter Pfister; Sandro Santagata; Peter K. Sorger (J. Open Source Softw., 2020)

Stitching and registering highly multiplexed whole-slide images of tissues and tumors using ASHLAR. - Jeremy Muhlich; Yu-An Chen; Clarence Han-Wei Yapp; Douglas Russell; Sandro Santagata; Peter K. Sorger (Bioinform., 2022)

Scope2Screen: Focus+Context Techniques for Pathology Tumor Assessment in Multivariate Image Data. - Jared Jessup; Robert Krüger; Simon Warchol; John Hoffer; Jeremy Muhlich; Cecily C. Ritch; Giorgio Gaglia; Shannon Coy; Yu-An Chen; Jia-Ren Lin; Sandro Santagata; Peter K. Sorger; et al. (IEEE Trans. Vis. Comput. Graph., 2022)

Visinity: Visual Spatial Neighborhood Analysis for Multiplexed Tissue Imaging Data. - Simon Warchol; Robert Krüger; Ajit Johnson Nirmal; Giorgio Gaglia; Jared Jessup; Cecily C. Ritch; John Hoffer; Jeremy Muhlich; Megan L. Burger; Tyler Jacks; Sandro Santagata; Peter K. Sorger; et al. (IEEE Trans. Vis. Comput. Graph., 2023)

labsyspharm/CRC_atlas_2022. - Jia-Ren Lin; Shu Wang; Shannon Coy; Yu-An Chen; Clarence Yapp; Madison Tyler; Maulik K. Nariya; Cody N. Heiser; Ken S. Lau; Sandro Santagata; Peter K. Sorger (Zenodo, 2023)