AptaTrans: a deep neural network for predicting aptamer-protein interaction using pretrained encoders. - Incheol Shin; Keumseok Kang; Juseong Kim; Sanghun Sel; Jeonghoon Choi; Jae-Wook Lee; Ho-Young Kang; Giltae Song (BMC Bioinform., 2023)

Predicting Protein-Ligand binding Residue with Token classification. - Keumseok Kang; Sanghun Sel; Jeongmu Kim; Giltae Song (BigComp, 2025)