jSquid: a Java applet for graphical on-line network exploration. - Martin Klammer; Sanjit Roopra; Erik L. L. Sonnhammer (Bioinform., 2008)

jSimMacs for GROMACS: A Java Application for Advanced Molecular Dynamics Simulations with Remote Access Capability. - Sanjit Roopra; Bernhard Knapp; Ulrich Omasits; Wolfgang Schreiner (J. Chem. Inf. Model., 2009)

InParanoid 7: new algorithms and tools for eukaryotic orthology analysis. - Gabriel Östlund; Thomas Schmitt 003; Kristoffer Forslund; Tina Köstler; David N. Messina; Sanjit Roopra; Oliver Frings; Erik L. L. Sonnhammer (Nucleic Acids Res., 2010)