CrossCT: CNN and Transformer cross–teaching for multimodal image cell segmentation. - Sara Joubbi; Giorgio Ciano; Dario Cardamone; Giuseppe Maccari; Duccio Medini (Cell Segmentation Challenge @ NeurIPS, 2022)

Pre-trained Models Based on Primary Sequence to Classify Antibody Binding to Protein and Non-protein Targets with 80% Accuracy. - Sara Joubbi; Giuseppe Maccari; Dario Cardamone; Giorgio Ciano; Alessio Micheli; Paolo Milazzo; Duccio Medini (CIBB, 2023)

Antibody design using deep learning: from sequence and structure design to affinity maturation. - Sara Joubbi; Alessio Micheli; Paolo Milazzo; Giuseppe Maccari; Giorgio Ciano; Dario Cardamone; Duccio Medini (Briefings Bioinform., 2024)

Improving Antibody-Antigen Interaction Prediction Through Flexibility with ESMFold. - Sara Joubbi; Giuseppe Maccari; Giorgio Ciano; Alessio Micheli; Paolo Milazzo; Duccio Medini (BIOSTEC (1), 2025)

HealthBranches: Synthesizing Clinically-Grounded Question Answering Datasets via Decision Pathways. - Cristian Cosentino; Annamaria Defilippo; Marco Dossena; Christopher Irwin; Sara Joubbi; Pietro Liò (CoRR, 2025)