CNstream: A method for the identification and genotyping of copy number polymorphisms using Illumina microarrays. - Arnald Alonso; Antonio Julià; Raül Tortosa; Cristina Canaleta; Juan D. Cañete; Javier Ballina; Alejandro Balsa; Jesús Tornero; Sara Marsal (BMC Bioinform., 2010)

AStream: an R package for annotating LC/MS metabolomic data. - Arnald Alonso; Antonio Julià; Antoni Beltran; Maria Vinaixa; Marta Díaz; Lourdes Ibañez; Xavier Correig; Sara Marsal (Bioinform., 2011)

aRNApipe: a balanced, efficient and distributed pipeline for processing RNA-seq data in high-performance computing environments. - Arnald Alonso; Brittany N. Lasseigne; Kelly Williams; Josh Nielsen; Ryne C. Ramaker; Andrew A. Hardigan; Bobbi Johnston; Brian S. Roberts; Sara J. Cooper; Sara Marsal; Richard M. Myers (Bioinform., 2017)