A&A for modelling and engineering simulations in Systems Biology. - Sara Montagna; Alessandro Ricci; Andrea Omicini (Int. J. Agent Oriented Softw. Eng., 2008)

Agent-Based Modeling of Stem Cells. - Paul Howells; Mark d'Inverno; Rob Saunders; Ingo Roeder; Sara Montagna (Multi-Agent Systems, 2009)

Parameter Tuning of a Stochastic Biological Simulator by Metaheuristics. - Sara Montagna; Andrea Roli (AI*IA, 2009)

A computational framework for modelling multicellular biochemistry. - Sara Montagna; Mirko Viroli (IEEE Congress on Evolutionary Computation, 2009)

A biochemical metaphor for developing eternally adaptive service ecosystems. - Mirko Viroli; Matteo Casadei; Sara Montagna; Franco Zambonelli (SAC, 2009)

An Agent-based Model for the Pattern Formation in Drosophila Melanogaster. - Sara Montagna; Nicola Donati; Andrea Omicini (ALIFE, 2010)

Spatial Coordination of Pervasive Systems through Chemical-Inspired Tuple Spaces. - Mirko Viroli; Matteo Casadei; Sara Montagna; Franco Zambonelli (SASO Workshops, 2010)

A Multiscale Agent-based Model of Morphogenesis in Biological Systems. - Sara Montagna; Andrea Omicini; Alessandro Ricci (WOA, 2010)

A Framework for Modelling and Simulating Networks of Cells. - Sara Montagna; Mirko Viroli (CS2Bio, 2010)

BIO-CORE: Bio-inspired Self-organising Mechanisms Core. - Jose Luis Fernandez-Marquez; Giovanna Di Marzo Serugendo; Sara Montagna (BIONETICS, 2011)

A Chemical Inspired Simulation Framework for Pervasive Services Ecosystems. - Danilo Pianini; Sara Montagna; Mirko Viroli (FedCSIS, 2011)

Description and composition of bio-inspired design patterns: the gradient case. - Jose Luis Fernandez-Marquez; Josep Lluís Arcos; Giovanna Di Marzo Serugendo; Mirko Viroli; Sara Montagna (BADS@ICAC, 2011)

Self-organising Pervasive Ecosystems: A Crowd Evacuation Example. - Sara Montagna; Mirko Viroli; Matteo Risoldi; Danilo Pianini; Giovanna Di Marzo Serugendo (SERENE, 2011)

A Simulation Framework for Pervasive Services Ecosystems. - Danilo Pianini; Mirko Viroli; Sara Montagna (WOA, 2011)

Self-aware Pervasive Service Ecosystems. - Franco Zambonelli; Gabriella Castelli; Laura Ferrari; Marco Mamei; Alberto Rosi; Giovanna Di Marzo Serugendo; Matteo Risoldi; Akla-Esso Tchao; Simon Dobson; Graeme Stevenson; Juan Ye; Elena Nardini 001; et al. (FET, 2011)

Spatial Coordination of Pervasive Services through Chemical-Inspired Tuple Spaces. - Mirko Viroli; Matteo Casadei; Sara Montagna; Franco Zambonelli (ACM Trans. Auton. Adapt. Syst., 2011)

A Computational Framework for Multilevel Morphologies. - Sara Montagna; Mirko Viroli (Morphogenetic Engineering, Toward Programmable Complex Systems, 2012)

A model for drosophila melanogaster development from a single cell to stripe pattern formation. - Sara Montagna; Danilo Pianini; Mirko Viroli (SAC, 2012)

Pervasive ecosystems: a coordination model based on semantic chemistry. - Mirko Viroli; Danilo Pianini; Sara Montagna; Graeme Stevenson (SAC, 2012)

Gradient-Based Self-Organisation Patterns of Anticipative Adaptation. - Sara Montagna; Danilo Pianini; Mirko Viroli (SASO, 2012)

Towards Situated Awareness in Urban Networks: A Bio-Inspired Approach. - Graeme Stevenson; Jose Luis Fernandez-Marquez; Sara Montagna; Alberto Rosi; Juan Ye; Akla-Esso Tchao; Simon Dobson; Giovanna Di Marzo Serugendo; Mirko Viroli (SASO Workshops, 2012)

Self-Organising Semantic Resource Discovery for Pervasive Systems. - Graeme Stevenson; Juan Ye; Simon Dobson; Mirko Viroli; Sara Montagna (SASO Workshops, 2012)

Towards a Comprehensive Approach to Spontaneous self-composition in Pervasive Ecosystems. - Sara Montagna; Mirko Viroli; Danilo Pianini; Jose Luis Fernandez-Marquez (WOA, 2012)

Combining self-organisation, context-awareness and semantic reasoning: the case of resource discovery in opportunistic networks. - Graeme Stevenson; Juan Ye; Simon Dobson; Danilo Pianini; Sara Montagna; Mirko Viroli (SAC, 2013)

Chemical-oriented simulation of computational systems with ALCHEMIST. - Danilo Pianini; Sara Montagna; Mirko Viroli (J. Simulation, 2013)

Injecting Self-Organisation into Pervasive Service Ecosystems. - Sara Montagna; Mirko Viroli; Jose Luis Fernandez-Marquez; Giovanna Di Marzo Serugendo; Franco Zambonelli (Mob. Networks Appl., 2013)

Description and composition of bio-inspired design patterns: a complete overview. - Jose Luis Fernandez-Marquez; Giovanna Di Marzo Serugendo; Sara Montagna; Mirko Viroli; Josep Lluís Arcos (Nat. Comput., 2013)

A Gillespie-based Computational Model for Integrating Event-driven and Multi-Agent Based Simulation: Extended Abstract. - Sara Montagna; Andrea Omicini; Danilo Pianini (AAMAS, 2015)

Extending the Gillespie's Stochastic Simulation Algorithm for Integrating Discrete-Event and Multi-Agent Based Simulation. - Sara Montagna; Andrea Omicini; Danilo Pianini (MABS, 2015)

Developing pervasive multi-agent systems with nature-inspired coordination. - Franco Zambonelli; Andrea Omicini; Bernhard Anzengruber; Gabriella Castelli; Francesco L. De Angelis; Giovanna Di Marzo Serugendo; Simon A. Dobson; Jose Luis Fernandez-Marquez; Alois Ferscha; Marco Mamei; Stefano Mariani 001; Ambra Molesini; et al. (Pervasive Mob. Comput., 2015)

A coordination model of pervasive service ecosystems. - Mirko Viroli; Danilo Pianini; Sara Montagna; Graeme Stevenson; Franco Zambonelli (Sci. Comput. Program., 2015)

A framework supporting multi-compartment stochastic simulation and parameter optimisation for investigating biological system development. - Sara Montagna; Mirko Viroli; Andrea Roli (Simul., 2015)

Towards the Adoption of Agent-Based Modelling and Simulation in Mobile Health Systems for the Self-Management of Chronic Diseases. - Sara Montagna; Andrea Omicini; Francesco Degli Angeli; Michele Donati (WOA, 2016)

Spatial awareness in pervasive ecosystems. - Simon A. Dobson; Mirko Viroli; Jose Luis Fernandez-Marquez; Franco Zambonelli; Graeme Stevenson; Giovanna Di Marzo Serugendo; Sara Montagna; Danilo Pianini; Juan Ye; Gabriella Castelli; Alberto Rosi (Knowl. Eng. Rev., 2016)

A Personal Medical Digital Assistant Agent for Supporting Human Operators in Emergency Scenarios. - Angelo Croatti; Sara Montagna; Alessandro Ricci (A2HC@AAMAS/A-HEALTH@PAAMS, 2017)

The Impact of Self-loops in Random Boolean Network Dynamics: A Simulation Analysis. - Sara Montagna; Michele Braccini; Andrea Roli (WIVACE, 2017)

Agent-based modeling for the self-management of chronic diseases: An exploratory study. - Sara Montagna; Andrea Omicini (Simul., 2017)

Self-loops Favour Diversification and Asymmetric Transitions Between Attractors in Boolean Network Models. - Michele Braccini; Sara Montagna; Andrea Roli (WIVACE, 2018)

Pervasive Tracking for Time-Dependent Acute Patient Flow: A Case Study in Trauma Management. - Sara Montagna; Angelo Croatti; Alessandro Ricci; Vanni Agnoletti; Vittorio Albarello (CBMS, 2019)

A simplified model of chromatin dynamics drives differentiation process in Boolean models of GRN. - Michele Braccini; Andrea Roli; Marco Villani 001; Sara Montagna; Roberto Serra (ALIFE, 2019)

The Effects of a Simplified Model of Chromatin Dynamics on Attractors Robustness in Random Boolean Networks with Self-loops: An Experimental Study. - Michele Braccini; Andrea Roli; Marco Villani 001; Sara Montagna; Roberto Serra (WIVACE, 2019)

BDI personal medical assistant agents: The case of trauma tracking and alerting. - Angelo Croatti; Sara Montagna; Alessandro Ricci; Emiliano Gamberini; Vittorio Albarello; Vanni Agnoletti (Artif. Intell. Medicine, 2019)

Autonomous agents and multi-agent systems applied in healthcare. - Sara Montagna; Daniel Castro Silva; Pedro Henriques Abreu; Márcia Ito; Michael Ignaz Schumacher; Eloisa Vargiu (Artif. Intell. Medicine, 2019)

Real-time tracking and documentation in trauma management. - Sara Montagna; Angelo Croatti; Alessandro Ricci; Vanni Agnoletti; Vittorio Albarello; Emiliano Gamberini (Health Informatics J., 2020)

On the Integration of Agents and Digital Twins in Healthcare. - Angelo Croatti; Matteo Gabellini; Sara Montagna; Alessandro Ricci (J. Medical Syst., 2020)

Complementing Agents with Cognitive Services: A Case Study in Healthcare. - Sara Montagna; Stefano Mariani 001; Emiliano Gamberini; Alessandro Ricci; Franco Zambonelli (J. Medical Syst., 2020)

Guest Editorial: Healthcare Intelligent Multi Agent Systems. - Neil Vaughan; Eloisa Vargiu; Stefano Mariani 001; Sara Montagna; Michael Schumacher 001 (J. Medical Syst., 2020)

Applying Telemedicine for Stroke Remote Diagnosis: the TeleStroke System. - Angelo Croatti; Marco Longoni; Sara Montagna (EUSPN/ICTH, 2021)

Augmenting BDI Agency with a Cognitive Service: Architecture and Validation in Healthcare Domain. - Sara Montagna; Stefano Mariani 001; Emiliano Gamberini (J. Medical Syst., 2021)

An Internet of Medical Things System to Increase Continuous Positive Airway Pressure Usage in Patients with Sleep-Disordered Breathing. - Angelo Croatti; Sara Montagna; Carolina Lombardi; Gianfranco Parati; Martino F. Pengo; Alessandro Silvani (SN Comput. Sci., 2021)

The Impact of Self-Loops on Boolean Networks Attractor Landscape and Implications for Cell Differentiation Modelling. - Sara Montagna; Michele Braccini; Andrea Roli (IEEE ACM Trans. Comput. Biol. Bioinform., 2021)

Machine learning for automated gating of flow cytometry data. - Muhammad Suffian Nizami; Sara Montagna; Alessandro Bogliolo; Claudio Ortolani; Stefano Papa; Mario D'Atri (HC@AIxIA, 2022)

Network Modularity based Clustering for Portfolio Allocation: a Monte-Carlo Simulation Study. - Stefano Ferretti; Sara Montagna (DS-RT, 2022)

Pervasive and Connected Digital Twins - A Vision for Digital Health. - Alessandro Ricci; Angelo Croatti; Sara Montagna (IEEE Internet Comput., 2022)

Web of Digital Twins. - Alessandro Ricci; Angelo Croatti; Stefano Mariani 001; Sara Montagna; Marco Picone (ACM Trans. Internet Techn., 2022)

Machine Learning-Enabled Prediction of Metabolite Response in Genetic Disorders (SHORT PAPER). - Christel Sirocchi; Federica Biancucci; Matteo Donati; Nunzio D'Amore; Riccardo Benedetti; Alessandro Bogliolo; Stefano Ferretti; Mauro Magnani; Michele Menotta; Muhammad Suffian Nizami; Sara Montagna (HC@AIxIA, 2023)

An Ecosystem of Digital Twins for Operating Room Management. - Samuele Burattini; Sara Montagna; Angelo Croatti; Nicola Gentili; Alessandro Ricci; Laura Leonardi; Serafino Pandolfini; Sofia Tosi (CBMS, 2023)

A Chatbot-based Recommendation Framework for Hypertensive Patients. - Sara Montagna; Stefano Mariani 001; Martino F. Pengo (CBMS, 2023)

Interpretable Machine Learning for Automated Cellular Population Analysis in Flow Cytometry. - Riccardo Benedetti; Muhammad Suffian Nizami; Alessandro Bogliolo; Barbara Canonico; Stefano Papa; Claudio Ortolani; Sara Montagna (CIBB, 2023)

Data Decentralisation of LLM-Based Chatbot Systems in Chronic Disease Self-Management. - Sara Montagna; Stefano Ferretti; Lorenz Cuno Klopfenstein; Antonio Florio; Martino Francesco Pengo (GoodIT, 2023)

Molecular Fingerprints-Based Machine Learning for Metabolic Profiling. - Christel Sirocchi; Federica Biancucci; Muhammad Suffian Nizami; Riccardo Benedetti; Matteo Donati; Stefano Ferretti; Alessandro Bogliolo; Mauro Magnani; Michele Menotta; Sara Montagna (PKDD/ECML Workshops (4), 2023)

Machine Learning in Hypertension Detection: A Study on World Hypertension Day Data. - Sara Montagna; Martino F. Pengo; Stefano Ferretti; Claudio Borghi; Claudio Ferri; Guido Grassi; Maria Lorenza Muiesan; Gianfranco Parati (J. Medical Syst., 2023)

A survey on agents applications in healthcare: Opportunities, challenges and trends. - Emilio Sulis; Stefano Mariani 001; Sara Montagna (Comput. Methods Programs Biomed., 2023)

Calibration of the Double Digital Twin for the Hand Rehabilitation by the Virtual Glove. - Alessandro Di Matteo; Daniele Lozzi; Enrico Mattei; Filippo Mignosi; Sara Montagna; Matteo Polsinelli; Giuseppe Placidi (CBMS, 2024)

Evaluating Machine Learning Models against Clinical Protocols for Enhanced Interpretability and Continuity of Care. - Christel Sirocchi; Muhammad Suffian Nizami; Federico Sabbatini; Alessandro Bogliolo; Sara Montagna (EXPLIMED@ECAI, 2024)

Conversational Skills of LLM-based Healthcare Chatbot for Personalized Communications. - Marco Furini; Michele Mariani; Sara Montagna; Stefano Ferretti (GoodIT, 2024)

Applying Retrieval-Augmented Generation on Open LLMs for a Medical Chatbot Supporting Hypertensive Patients. - Gianluca Aguzzi; Matteo Magnini; Stefano Ferretti; Giuseppe Pio Salcuni; Sara Montagna (HC@AIxIA, 2024)

Proactive Hand Rehabilitation Through a Double Digital Twin Provided by the Virtual Glove. - Alessandro Di Matteo; Daniele Lozzi; Enrico Mattei; Sara Montagna; Alessia Cipriani; Filippo Mignosi; Giuseppe Placidi (MetroXRAINE, 2024)

A Digital Twins Approach for Oncologic Pharmaceutical Supply Chain. - Samuele Burattini; Sara Montagna; Nicola Gentili; Francesca Galardi; Roberto Vespignani; Paolo Zanatto; Angelo Croatti; Alessandro Ricci (PerCom Workshops, 2024)

LLM-based Solutions for Healthcare Chatbots: a Comparative Analysis. - Sara Montagna; Gianluca Aguzzi; Stefano Ferretti; Martino Francesco Pengo; Lorenz Cuno Klopfenstein; Michelangelo Ungolo; Matteo Magnini (PerCom Workshops, 2024)

Integrating Symbolic Knowledge and Machine Learning in Healthcare. - Christel Sirocchi; Sara Montagna (RuleML+RR (Companion), 2024)

Hybrid Personal Medical Digital Assistant Agents. - Sara Montagna; Christel Sirocchi (WOA, 2024)

Agent-based systems in healthcare. - Sara Montagna; Stefano Mariani 001; Michael Ignaz Schumacher; Gaetano Manzo (Comput. Methods Programs Biomed., 2024)

Exploring machine learning for untargeted metabolomics using molecular fingerprints. - Christel Sirocchi; Federica Biancucci; Matteo Donati; Alessandro Bogliolo; Mauro Magnani; Michele Menotta; Sara Montagna (Comput. Methods Programs Biomed., 2024)

Medical-informed machine learning: integrating prior knowledge into medical decision systems. - Christel Sirocchi; Alessandro Bogliolo; Sara Montagna (BMC Medical Informatics Decis. Mak., 2024)

A Fine-Tuning Pipeline with Small Conversational Data for Healthcare Chatbot. - Gianluca Aguzzi; Matteo Magnini; Martino Francesco Pengo; Mirko Viroli; Sara Montagna (AIME (2), 2025)

Neuro-Symbolic AI for Supporting Chronic Disease Diagnosis and Monitoring. - Matteo Magnini; Giovanni Ciatto; Ahmet Emre Kuru; Christel Sirocchi; Sara Montagna (PerCom Workshops, 2025)

Decentralized Health Data Management: An IPFS-based Approach and Performance Evaluation. - Francesco Franco; Alessandro Bogliolo; Sara Montagna; Luca Bedogni; Stefano Ferretti (WETICE, 2025)

Distributing intelligent functionalities in the Internet of Things with agents and Digital Twins. - Samuele Burattini; Stefano Mariani 001; Sara Montagna; Marco Picone; Alessandro Ricci (Internet Things, 2025)