% csauthors.net - beta - BibTeX bibliography of Sarah A. Teichmann
@article{journals/bioinformatics/ParkT98,
title = {DIVCLUS: an automatic method in the GEANFAMMER package that finds homologous domains in single- and multi-domain proteins.},
year = {1998},
journal = {Bioinform.},
author = {{Jong C. Park} and {Sarah A. Teichmann}}
}
@inproceedings{conf/recomb/TeichmannPC99,
title = {Genome sequences and protein structures.},
year = {1999},
booktitle = {RECOMB},
author = {{Sarah A. Teichmann} and {Jong C. Park} and {Cyrus Chothia}},
publisher = {ACM},
booktitle = {Proceedings of the Third Annual International Conference on Research in Computational Molecular Biology, RECOMB 1999, Lyon, France, April 11-14, 1999}
}
@inproceedings{conf/recomb/TeichmannCCP00,
title = {PDB_ISL: an intermediate sequence library for protein structure assignment.},
year = {2000},
booktitle = {RECOMB},
author = {{Sarah A. Teichmann} and {Cyrus Chothia} and {George M. Church} and {Jong C. Park}},
publisher = {ACM},
booktitle = {Proceedings of the Fourth Annual International Conference on Computational Molecular Biology, RECOMB 2000, Tokyo, Japan, April 8-11, 2000}
}
@article{journals/bioinformatics/TeichmannCCP00,
title = {Fast assignment of protein structures to sequences using the Intermediate Sequence Library PDB-ISL.},
year = {2000},
journal = {Bioinform.},
author = {{Sarah A. Teichmann} and {Cyrus Chothia} and {George M. Church} and {Jong C. Park}}
}
@inproceedings{conf/ismb/ApicGT01,
title = {An insight into domain combinations.},
year = {2001},
booktitle = {ISMB (Supplement of Bioinformatics)},
author = {{Gordana Apic} and {Julian Gough} and {Sarah A. Teichmann}},
booktitle = {Proceedings of the Ninth International Conference on Intelligent Systems for Molecular Biology, July 21-25, 2001, Copenhagen, Denmark}
}
@inproceedings{conf/eccb/Teichmann02,
title = {Principles of protein-protein interactions.},
year = {2002},
booktitle = {ECCB},
author = {{Sarah A. Teichmann}},
booktitle = {Proceedings of the European Conference on Computational Biology (ECCB 2002), October 6-9, 2002, Saarbrücken, Germany}
}
@article{journals/bioinformatics/KuninTHO05,
title = {The properties of protein family space depend on experimental design.},
year = {2005},
journal = {Bioinform.},
author = {{Victor Kunin} and {Sarah A. Teichmann} and {Martijn A. Huynen} and {Christos A. Ouzounis}}
}
@article{journals/bioinformatics/NyeBGBT05,
title = {Statistical analysis of domains in interacting protein pairs.},
year = {2005},
journal = {Bioinform.},
author = {{Tom M. W. Nye} and {Carlo Berzuini} and {Walter R. Gilks} and {M. Madan Babu} and {Sarah A. Teichmann}}
}
@article{journals/bioinformatics/AdryanT06,
title = {FlyTF: a systematic review of site-specific transcription factors in the fruit fly Drosophila melanogaster.},
year = {2006},
journal = {Bioinform.},
author = {{Boris Adryan} and {Sarah A. Teichmann}}
}
@article{journals/nar/KummerfeldT06,
title = {DBD: a transcription factor prediction database.},
year = {2006},
journal = {Nucleic Acids Res.},
author = {{Sarah K. Kummerfeld} and {Sarah A. Teichmann}}
}
@article{journals/ploscb/LevyPCT06,
title = {3D Complex: A Structural Classification of Protein Complexes.},
year = {2006},
journal = {PLoS Comput. Biol.},
author = {{Emmanuel D. Levy} and {José B. Pereira-Leal} and {Cyrus Chothia} and {Sarah A. Teichmann}}
}
@article{journals/ploscb/TalaveraVOTC07,
title = {The (In)dependence of Alternative Splicing and Gene Duplication.},
year = {2007},
journal = {PLoS Comput. Biol.},
author = {{David Talavera} and {Christine Vogel} and {Modesto Orozco} and {Sarah A. Teichmann} and {Xavier de la Cruz}}
}
@article{journals/nar/WilsonCKT08,
title = {DBD--taxonomically broad transcription factor predictions: new content and functionality.},
year = {2008},
journal = {Nucleic Acids Res.},
author = {{Derek Wilson} and {Varodom Charoensawan} and {Sarah K. Kummerfeld} and {Sarah A. Teichmann}}
}
@article{journals/bmcbi/KummerfeldT09,
title = {Protein domain organisation: adding order.},
year = {2009},
journal = {BMC Bioinform.},
author = {{Sarah K. Kummerfeld} and {Sarah A. Teichmann}}
}
@article{journals/nar/Miranda-SaavedraDTTG09,
title = {BloodExpress: a database of gene expression in mouse haematopoiesis.},
year = {2009},
journal = {Nucleic Acids Res.},
author = {{Diego Miranda-Saavedra} and {Subhajyoti De} and {Matthew W. B. Trotter} and {Sarah A. Teichmann} and {Berthold Göttgens}}
}
@article{journals/nar/PfreundtJTWTA10,
title = {FlyTF: improved annotation and enhanced functionality of the Drosophila transcription factor database.},
year = {2010},
journal = {Nucleic Acids Res.},
author = {{Ulrike Pfreundt} and {Daniel P. James} and {Susan Tweedie} and {Derek Wilson} and {Sarah A. Teichmann} and {Boris Adryan}}
}
@article{journals/ploscb/SuTD10,
title = {Assessing Computational Methods of Cis-Regulatory Module Prediction.},
year = {2010},
journal = {PLoS Comput. Biol.},
author = {{Jing Su} and {Sarah A. Teichmann} and {Thomas A. Down}}
}
@article{journals/nature/YuTWCWCBKCLBMTD16,
title = {Single-cell RNA-seq identifies a PD-1hi ILC progenitor and defines its development pathway.},
year = {2016},
journal = {Nat.},
author = {{Yong Yu} and {Jason C. H. Tsang} and {Cui Wang} and {Simon Clare} and {Juexuan Wang} and {Xi Chen 039} and {Cordelia Brandt} and {Leanne Kane} and {Lia S. Campos} and {Liming Lu} and {Gabrielle T. Belz} and {Andrew N. J. McKenzie} and {Sarah A. Teichmann} and {Gordon Dougan} and {Pentao Liu}}
}
@article{journals/nature/PopescuBSGWJCPG19,
title = {Decoding human fetal liver haematopoiesis.},
year = {2019},
journal = {Nat.},
author = {{Dorin-Mirel Popescu} and {Rachel A. Botting} and {Emily Stephenson} and {Kile Green} and {Simone Webb} and {Laura Jardine} and {Emily F. Calderbank} and {Krzysztof Polanski} and {Issac Goh} and {Mirjana Efremova} and {Meghan Acres} and {Daniel Maunder} and {Peter Vegh} and {Yorick Gitton} and {Jong-Eun Park} and {Roser Vento-Tormo} and {Zhichao Miao} and {David Dixon} and {Rachel Rowell} and {David McDonald} and {James Fletcher} and {Elizabeth Poyner} and {Gary Reynolds} and {Michael Mather} and {Corina Moldovan} and {Lira Mamanova} and {Frankie Greig} and {Matthew D. Young} and {Kerstin B. Meyer} and {Steven Lisgo} and {Jaume Bacardit} and {Andrew Fuller} and {Ben Millar} and {Barbara Innes} and {Susan Lindsay} and {Michael J. T. Stubbington} and {Monika S. Kowalczyk} and {Bo Li 015} and {Orr Ashenberg} and {Marcin Tabaka} and {Danielle Dionne} and {Timothy L. Tickle} and {Michal Slyper} and {Orit Rozenblatt-Rosen} and {Andrew Filby} and {Peter Carey} and {Alexandra-Chloé Villani} and {Anindita Roy} and {Aviv Regev} and {Alain Chédotal} and {Irene Roberts} and {Berthold Göttgens} and {Sam Behjati} and {Elisa Laurenti} and {Sarah A. Teichmann} and {Muzlifah Haniffa}}
}
@article{journals/nature/SnyderLPARRRGHS19,
title = {The human body at cellular resolution: the NIH Human Biomolecular Atlas Program.},
year = {2019},
journal = {Nat.},
author = {{Michael P. Snyder} and {Shin Lin} and {Amanda Posgai} and {Mark Atkinson} and {Aviv Regev} and {Jennifer Rood} and {Orit Rozenblatt-Rosen} and {Leslie Gaffney} and {Anna Hupalowska} and {Rahul Satija} and {Nils Gehlenborg} and {Jay Shendure} and {Julia Laskin} and {Pehr Harbury} and {Nicholas A. Nystrom} and {Jonathan C. Silverstein} and {Ziv Bar-Joseph} and {Kun Zhang 020} and {Katy Börner} and {Yiing Lin} and {Richard Conroy} and {Dena Procaccini} and {Ananda L. Roy} and {Ajay Pillai} and {Marishka Brown} and {Zorina S. Galis} and {Long Cai} and {Cole Trapnell} and {Dana Jackson} and {Garry P. Nolan} and {William James Greenleaf} and {Sylvia K. Plevritis} and {Sara Ahadi} and {Stephanie A. Nevins} and {Hayan Lee} and {Christian Martijn Schuerch} and {Sarah Black} and {Vishal Gautham Venkataraaman} and {Ed Esplin} and {Aaron Horning} and {Amir Bahmani} and {Xin Sun} and {Sanjay Jain 006} and {James S. Hagood} and {Gloria Pryhuber} and {Peter V. Kharchenko} and {Bernd Bodenmiller} and {Todd Brusko} and {Michael Clare-Salzler} and {Harry Nick} and {Kevin Otto 001} and {Clive Wasserfall} and {Marda Jorgensen} and {Maigan Brusko} and {Sergio Maffioletti} and {Richard M. Caprioli} and {Jeffrey M. Spraggins} and {Danielle Gutierrez} and {Nathan Heath Patterson} and {Elizabeth K. Neumann} and {Raymond Harris} and {Mark P. de Caestecker} and {Agnes B. Fogo} and {Raf Van de Plas} and {Ken Lau} and {Guo-Cheng Yuan} and {Qian Zhu} and {Ruben Dries} and {Peng Yin} and {Sinem K. Saka} and {Jocelyn Y. Kishi} and {Yu Wang} and {Isabel Goldaracena} and {Dong Hye Ye} and {Kristin E. Burnum-Johnson} and {Paul D. Piehowski} and {Charles Ansong} and {Ying Zhu} and {Tushar Desai} and {Jay Mulye} and {Peter Chou} and {Monica Nagendran} and {Sarah A. Teichmann} and {Benedict Paten} and {Robert F. Murphy} and {Jian Ma 004} and {Vladimir Yu. Kiselev} and {Carl Kingsford} and {Allyson Ricarte} and {Maria Keays} and {Sushma Anand Akoju} and {Matthew Ruffalo} and {Margaret Vella} and {Chuck McCallum} and {Leonard E. Cross} and {Samuel H. Friedman} and {Randy W. Heiland} and {Bruce William Herr II} and {Paul Macklin} and {Ellen M. Quardokus} and {Lisel Record} and {James P. Sluka} and {Griffin M. Weber} and {Philip D. Blood} and {Alexander Ropelewski} and {William Shirey} and {Robin M. Scibek} and {Paula M. Mabee} and {W. Christopher Lenhardt} and {Kimberly Robasky} and {Stavros Michailidis} and {John C. Marioni} and {Andrew Butler} and {Tim Stuart} and {Eyal Fisher} and {Shila Ghazanfar} and {Gökcen Eraslan} and {Tommaso Biancalani} and {Eeshit D. Vaishnav} and {Pothur Srinivas} and {Aaron Pawlyk} and {Salvatore Sechi} and {Elizabeth L. Wilder} and {James Anderson}}
}
@article{journals/bioinformatics/PolanskiYMMTP20,
title = {BBKNN: fast batch alignment of single cell transcriptomes.},
year = {2020},
journal = {Bioinform.},
author = {{Krzysztof Polanski} and {Matthew D. Young} and {Zhichao Miao} and {Kerstin B. Meyer} and {Sarah A. Teichmann} and {Jong-Eun Park}}
}
@article{journals/nar/PapatheodorouMM20,
title = {Expression Atlas update: from tissues to single cells.},
year = {2020},
journal = {Nucleic Acids Res.},
author = {{Irene Papatheodorou} and {Pablo A. Moreno} and {Jonathan R. Manning} and {Alfonso Muñoz-Pomer Fuentes} and {Nancy George} and {Silvie Fexova} and {Nuno A. Fonseca} and {Anja Füllgrabe} and {Matthew Green 005} and {Ni Huang} and {Laura Huerta} and {Haider Iqbal} and {Monica Jianu} and {Suhaib Mohammed} and {Lingyun Zhao} and {Andrew F. Jarnuczak} and {Simon Jupp} and {John C. Marioni} and {Kerstin B. Meyer} and {Robert Petryszak} and {Cesar Augusto Prada Medina} and {Carlos Talavera-López} and {Sarah A. Teichmann} and {Juan Antonio Vizcaíno} and {Alvis Brazma}}
}
@inproceedings{conf/mlcb/LalchandRDKSLMT22,
title = {Modelling Technical and Biological Effects in scRNA-seq data with Scalable GPLVMs.},
year = {2022},
booktitle = {MLCB},
author = {{Vidhi Lalchand} and {Aditya Ravuri} and {Emma Dann} and {Natsuhiko Kumasaka} and {Dinithi Sumanaweera} and {Rik G. H. Lindeboom} and {Shaista Madad} and {Sarah A. Teichmann} and {Neil D. Lawrence}},
publisher = {PMLR},
booktitle = {Machine Learning in Computational Biology, 21-22 November 2022, Online}
}
@article{journals/nar/MorenoFGMMMFFBB22,
title = {Expression Atlas update: gene and protein expression in multiple species.},
year = {2022},
journal = {Nucleic Acids Res.},
author = {{Pablo A. Moreno} and {Silvie Fexova} and {Nancy George} and {Jonathan R. Manning} and {Zhichao Miao} and {Suhaib Mohammed} and {Alfonso Muñoz-Pomer Fuentes} and {Anja Füllgrabe} and {Yalan Bi} and {Natassja Bush} and {Haider Iqbal} and {Upendra Kumbham} and {Andrey Solovyev} and {Lingyun Zhao} and {Ananth Prakash} and {David García-Seisdedos} and {Deepti Jaiswal Kundu} and {Shengbo Wang} and {Mathias Walzer} and {Laura Clarke} and {David Osumi-Sutherland} and {Marcela Karey Tello-Ruiz} and {Sunita Kumari} and {Doreen Ware} and {Jana Eliasova} and {Mark J. Arends} and {Martijn C. Nawijn} and {Kerstin B. Meyer} and {Tony Burdett} and {John C. Marioni} and {Sarah A. Teichmann} and {Juan Antonio Vizcaíno} and {Alvis Brazma} and {Irene Papatheodorou}}
}