Pops: a Computational Tool for Modeling and Predicting Protease Specificity. - Sarah E. Boyd; Robert N. Pike; George B. Rudy; James C. Whisstock; Maria J. García de la Banda (J. Bioinform. Comput. Biol., 2005)

PMAP: databases for analyzing proteolytic events and pathways. - Yoshinobu Igarashi; Emily Heureux; Kutbuddin S. Doctor; Priti Talwar; Svetlana Gramatikova; Kosi Gramatikoff; Ying Zhang 004; Michael L. Blinov; Salmaz S. Ibragimova; Sarah E. Boyd; Boris I. Ratnikov; Piotr Cieplak; et al. (Nucleic Acids Res., 2009)

Cascleave: towards more accurate prediction of caspase substrate cleavage sites. - Jiangning Song; Hao Tan; Hong-Bin Shen; Khalid Mahmood 001; Sarah E. Boyd; Geoffrey I. Webb; Tatsuya Akutsu; James C. Whisstock (Bioinform., 2010)

Bioinformatic Approaches for Predicting substrates of Proteases. - Jiangning Song; Hao Tan; Sarah E. Boyd; Hong-Bin Shen; Khalid Mahmood 001; Geoffrey I. Webb; Tatsuya Akutsu; James C. Whisstock; Robert N. Pike (J. Bioinform. Comput. Biol., 2011)

Software support for SBGN maps: SBGN-ML and LibSBGN. - Martijn P. van Iersel; Alice Villéger; Tobias Czauderna; Sarah E. Boyd; Frank T. Bergmann; Augustin Luna; Emek Demir; Anatoly A. Sorokin; Ugur Dogrusöz; Yukiko Matsuoka; Akira Funahashi; Mirit I. Aladjem; et al. (Bioinform., 2012)

A Bayesian method for comparing and combining binary classifiers in the absence of a gold standard. - Jonathan M. Keith; Christian M. Davey; Sarah E. Boyd (BMC Bioinform., 2012)

Interactive Geolocational and Coral Compositional Visualisation of Great Barrier Reef Heat Stress Data. - Hieu T. Nim; Terence Done; Falk Schreiber; Sarah E. Boyd (BDVA, 2015)

VISIONET: intuitive visualisation of overlapping transcription factor networks, with applications in cardiogenic gene discovery. - Hieu T. Nim; Milena B. Furtado; Mauro W. Costa; Nadia A. Rosenthal; Hiroaki Kitano; Sarah E. Boyd (BMC Bioinform., 2015)

Communicating the Effect of Human Behaviour on the Great Barrier Reef via Mixed Reality Visualisation. - Hieu T. Nim; Mengyang Wang; Yujie Zhu; Björn Sommer 001; Falk Schreiber; Sarah E. Boyd; Stephen Jia Wang (BDVA, 2016)

3D-Stereoscopic Immersive Analytics Projects at Monash University and University of Konstanz. - Björn Sommer 001; David G. Barnes; Sarah E. Boyd; Tom Chandler; Maxime Cordeil; Tobias Czauderna; Matthias Klapperstück; Karsten Klein 001; Toàn D. Nguyên; Hieu T. Nim; Kingsley Stephens; Dany Vohl; et al. (SD&A, 2017)