10 Years of the International Conference on Research in Computational Molecular Biology (RECOMB). - Sarah J. Aerni; Eleazar Eskin (RECOMB, 2006)

Reconstruction of genealogical relationships with applications to Phase III of HapMap. - Sofia Kyriazopoulou-Panagiotopoulou; Dorna Kashef Haghighi; Sarah J. Aerni; Andreas Sundquist; Sivan Bercovici; Serafim Batzoglou (Bioinform., 2011)

Reconstructing cancer genomes from paired-end sequencing data. - Layla Oesper; Anna M. Ritz; Sarah J. Aerni; Ryan Drebin; Benjamin J. Raphael (BMC Bioinform., 2012)

Automated cellular annotation for high-resolution images of adult Caenorhabditis elegans. - Sarah J. Aerni; Xiao Liu; Chuong B. Do; Samuel S. Gross; Andy Nguyen; Stephen D. Guo; Fuhui Long; Hanchuan Peng; Stuart S. Kim; Serafim Batzoglou (Bioinform., 2013)