Domain size distributions can predict domain boundaries. - Sarah J. Wheelan; Aron Marchler-Bauer; Stephen H. Bryant (Bioinform., 2000)

Genome Research: The Second Decade. a Report on the XI Cold Spring Harbor Laboratory Meeting on Genome Mapping and Sequencing, May 13-17, 1998, Cold Spring Harbor, NY. - Sarah J. Wheelan; Wojciech Makalowski (Comput. Chem., 2000)

Exploring Massive, Genome Scale Datasets with the GenometriCorr Package. - Alexander V. Favorov; Loris Mularoni; Leslie M. Cope; Yulia A. Medvedeva; Andrey A. Mironov; Vsevolod J. Makeev; Sarah J. Wheelan (PLoS Comput. Biol., 2012)

Efficient "pythonic" access to FASTA files using pyfaidx. - Matthew D. Shirley; Zhaorong Ma; Brent S. Pedersen; Sarah J. Wheelan (PeerJ Prepr., 2015)

StereoGene: rapid estimation of genome-wide correlation of continuous or interval feature data. - Elena D. Stavrovskaya; Tejasvi Niranjan; Elana J. Fertig; Sarah J. Wheelan; Alexander V. Favorov; Andrey A. Mironov (Bioinform., 2017)

The Terabase Search Engine: a large-scale relational database of short-read sequences. - Richard Wilton; Sarah J. Wheelan; Alexander S. Szalay; Steven L. Salzberg (Bioinform., 2019)