A method for visualizing CellML models. - Sarala M. Wimalaratne; Matt D. B. Halstead; Catherine M. Lloyd; Mike T. Cooling; Edmund J. Crampin; Poul M. F. Nielsen (Bioinform., 2009)

Biophysical annotation and representation of CellML models. - Sarala M. Wimalaratne; Matt D. B. Halstead; Catherine M. Lloyd; Edmund J. Crampin; Poul M. F. Nielsen (Bioinform., 2009)

Ontology-Strength Industry Standards: The Case of the Clinical Trial Domain. - Pierre Grenon; Sarala M. Wimalaratne; Bernard de Bono (FOMI, 2011)

A common layer of interoperability for biomedical ontologies based on OWL EL. - Robert Hoehndorf; Michel Dumontier; Anika Oellrich; Sarala M. Wimalaratne; Dietrich Rebholz-Schuhmann; Paul N. Schofield; Georgios V. Gkoutos (Bioinform., 2011)

Model annotation for synthetic biology: automating model to nucleotide sequence conversion. - Goksel Misirli; Jennifer Hallinan; Tommy Yu; James R. Lawson; Sarala M. Wimalaratne; Mike T. Cooling; Anil Wipat (Bioinform., 2011)

Revision history aware repositories of computational models of biological systems. - Andrew K. Miller; Tommy Yu; Randall Britten; Mike T. Cooling; James R. Lawson; Dougal Cowan; Alan Garny; Matt D. B. Halstead; Peter J. Hunter; David P. Nickerson; Geoff Nunns; Sarala M. Wimalaratne; et al. (BMC Bioinform., 2011)

Integrating systems biology models and biomedical ontologies. - Robert Hoehndorf; Michel Dumontier; John H. Gennari; Sarala M. Wimalaratne; Bernard de Bono; Daniel L. Cook; Georgios V. Gkoutos (BMC Syst. Biol., 2011)

An infrastructure for ontology-based information systems in biomedicine: RICORDO case study. - Sarala M. Wimalaratne; Pierre Grenon; Robert Hoehndorf; Georgios V. Gkoutos; Bernard de Bono (Bioinform., 2012)

The EBI RDF platform: linked open data for the life sciences. - Simon Jupp; James Malone; Jerven T. Bolleman; Marco Brandizi; Mark Davies; Leyla J. García; Anna Gaulton; Sebastien Gehant; Camille Laibe; Nicole Redaschi; Sarala M. Wimalaratne; Maria Jesus Martin; et al. (Bioinform., 2014)

BioModels linked dataset. - Sarala M. Wimalaratne; Pierre Grenon; Henning Hermjakob; Nicolas Le Novère; Camille Laibe (BMC Syst. Biol., 2014)

SPARQL-enabled identifier conversion with Identifiers.org. - Sarala M. Wimalaratne; Jerven T. Bolleman; Nick S. Juty; Toshiaki Katayama; Michel Dumontier; Nicole Redaschi; Nicolas Le Novère; Henning Hermjakob; Camille Laibe (Bioinform., 2015)

BioModels: ten-year anniversary. - Vijayalakshmi Chelliah; Nick S. Juty; Ishan Ajmera; Raza Ali; Marine Dumousseau; Mihai Glont; Michael Hucka; Gaël Jalowicki; Sarah M. Keating; Vincent Knight-Schrijver; Audald Lloret-Villas; Kedar Nath Natarajan; et al. (Nucleic Acids Res., 2015)

ProbOnto: ontology and knowledge base of probability distributions. - Maciej J. Swat; Pierre Grenon; Sarala M. Wimalaratne (Bioinform., 2016)

BioModels: expanding horizons to include more modelling approaches and formats. - Mihai Glont; Tung V. N. Nguyen; Martin Graesslin; Robert Hälke; Raza Ali; Jochen Schramm; Sarala M. Wimalaratne; Varun B. Kothamachu; Nicolas Rodriguez 001; Maciej J. Swat; Jurgen Eils; Roland Eils; et al. (Nucleic Acids Res., 2018)

BioHackathon series in 2013 and 2014: improvements of semantic interoperability in life science data and services. - Toshiaki Katayama; Shuichi Kawashima; Gos Micklem; Shin Kawano; Jin-Dong Kim; Simon Kocbek; Shinobu Okamoto; Yue Wang 040; Hongyan Wu; Atsuko Yamaguchi; Yasunori Yamamoto; Erick Antezana; et al. (F1000Research, 2019)

Unique, Persistent, Resolvable: Identifiers as the Foundation of FAIR. - Nick S. Juty; Sarala M. Wimalaratne; Stian Soiland-Reyes; John A. Kunze; Carole A. Goble; Tim Clark (Data Intell., 2020)

Identifiers.org: Compact Identifier services in the cloud. - Manuel Bernal Llinares; Javier Ferrer-Gómez; Nick S. Juty; Carole A. Goble; Sarala M. Wimalaratne; Henning Hermjakob (Bioinform., 2021)