Huvariome: a web server resource of whole genome next-generation sequencing allelic frequencies to aid in pathological candidate gene selection. - Andrew Stubbs; Elizabeth A. McClellan; Sebastiaan Horsman; Saskia D. Hiltemann; Ivo Palli; Stephan Nouwens; Anton H. J. Koning; Frits Hoogland; Joke Reumers; Daphne Heijsman; Sigrid Swagemakers; Andreas Kremer; et al. (J. Clin. Bioinform., 2012)

iFUSE: integrated fusion gene explorer. - Saskia D. Hiltemann; Elizabeth A. McClellan; Jos van Nijnatten; Sebastiaan Horsman; Ivo Palli; Ines Teles Alves; Thomas Hartjes; Jan Trapman; Peter J. van der Spek; Guido Jenster; Andrew Stubbs (Bioinform., 2013)

FuMa: reporting overlap in RNA-seq detected fusion genes. - Youri Hoogstrate; René Böttcher; Saskia D. Hiltemann; Peter J. van der Spek; Guido Jenster; Andrew Stubbs (Bioinform., 2016)

Integration of EGA secure data access into Galaxy. - Youri Hoogstrate; Chao Zhang; Alexander Senf; Jochem Bijlard; Saskia D. Hiltemann; David van Enckevort; Susanna Repo; Jaap Heringa; Guido Jenster; Remond J. A. Fijneman; Jan-Willem Boiten; Gerrit A. Meijer; et al. (F1000Research, 2016)

Systematically linking tranSMART, Galaxy and EGA for reusing human translational research data. - Chao Zhang; Jochem Bijlard; Christine Staiger; Serena A. Scollen; David van Enckevort; Youri Hoogstrate; Alexander Senf; Saskia D. Hiltemann; Susanna Repo; Wibo Pipping; Mariska Bierkens; Stefan Payralbe; et al. (F1000Research, 2017)

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2018 update. - Enis Afgan; Dannon Baker; Bérénice Batut; Marius van den Beek; Dave Bouvier; Martin Cech; John Chilton; Dave Clements; Nate Coraor; Björn A. Grüning; Aysam Guerler; Jennifer Hillman-Jackson; et al. (Nucleic Acids Res., 2018)

ASaiM-MT: a validated and optimized ASaiM workflow for metatranscriptomics analysis within Galaxy framework. - Subina P. Mehta; Marie Crane; Emma Leith; Bérénice Batut; Saskia D. Hiltemann; Magnus Ø. Arntzen; Benoît Josef Kunath; Francesco Delogu; Ray Sajulga; Praveen Kumar; James E. Johnson; Timothy J. Griffin; et al. (F1000Research, 2021)

Fostering accessible online education using Galaxy as an e-learning platform. - Beatriz Serrano-Solano; Melanie Christine Föll; Cristóbal Gallardo-Alba; Anika Erxleben; Helena Rasche; Saskia D. Hiltemann; Matthias Fahrner; Mark J. Dunning; Marcel H. Schulz; Beáta Scholtz; Dave Clements; Anton Nekrutenko; et al. (PLoS Comput. Biol., 2021)

The Galaxy platform for accessible, reproducible and collaborative biomedical analyses: 2022 update. - Enis Afgan; Anton Nekrutenko; Björn A. Grüning; Daniel J. Blankenberg; Jeremy Goecks; Michael C. Schatz; Alexander E. Ostrovsky; Alexandru Mahmoud; Andrew J. Lonie; Anna Syme; Anne Fouilloux; Anthony Bretaudeau; et al. (Nucleic Acids Res., 2022)

Galaxy Training: A powerful framework for teaching! - Saskia D. Hiltemann; Helena Rasche; Simon L. Gladman; Hans-Rudolf Hotz; Delphine Larivière; Daniel J. Blankenberg; Pratik D. Jagtap; Thomas Wollmann; Anthony Bretaudeau; Nadia Goué; Timothy J. Griffin; Coline Royaux; et al. (PLoS Comput. Biol., 2023)