Improving progressive alignment for phylogeny reconstruction using parsimonious guide-trees. - Usman Roshan; Dennis R. Livesay; Satish Chikkagoudar (BIBE, 2006)

eProbalign: generation and manipulation of multiple sequence alignments using partition function posterior probabilities. - Satish Chikkagoudar; Usman Roshan; Dennis R. Livesay (Nucleic Acids Res., 2007)

Searching for evolutionary distant RNA homologs within genomic sequences using partition function posterior probabilities. - Usman Roshan; Satish Chikkagoudar; Dennis R. Livesay (BMC Bioinform., 2008)

PLAST-ncRNA: Partition function Local Alignment Search Tool for non-coding RNA sequences. - Satish Chikkagoudar; Dennis R. Livesay; Usman Roshan (Nucleic Acids Res., 2010)

Annotating the structure and components of a nanoparticle formulation using computable string expressions. - Dennis G. Thomas; Satish Chikkagoudar; Alan R. Chappell; Nathan A. Baker (BIBM Workshops, 2012)

Towards Real-Time High Performance Computing for Power Grid Analysis. - Peter Hui; Barry Lee; Satish Chikkagoudar (SC Companion, 2012)

A Formal Model For Real-Time Parallel Computation - Peter Hui; Satish Chikkagoudar (FTSCS, 2012)

Impact of network activity levels on the performance of passive network service dependency discovery. - Thomas E. Carroll; Satish Chikkagoudar; Kristine Arthur-Durett (MILCOM, 2015)

Disentangling the Lexicons of Disaster Response in Twitter. - Nathan O. Hodas; Greg Ver Steeg; Joshua J. Harrison; Satish Chikkagoudar; Eric Bell; Courtney D. Corley (WWW (Companion Volume), 2015)

Extracting Workflows from Natural Language Documents: A First Step. - Leslie Shing; Allan B. Wollaber; Satish Chikkagoudar; Joseph Yuen; Paul Alvino; Alexander Chambers; Tony Allard (Business Process Management Workshops, 2018)

Discovering Significant Co-Occurrences to Characterize Network Behaviors. - Kristine Arthur-Durett; Thomas E. Carroll; Satish Chikkagoudar (HCI (4), 2018)

Malware Detection Using Frequency Domain-Based Image Visualization and Deep Learning. - Tajuddin Manhar Mohammed; Lakshmanan Nataraj; Satish Chikkagoudar; Shivkumar Chandrasekaran; B. S. Manjunath (HICSS, 2021)

HAPSSA: Holistic Approach to PDF malware detection using Signal and Statistical Analysis. - Tajuddin Manhar Mohammed; Lakshmanan Nataraj; Satish Chikkagoudar; Shivkumar Chandrasekaran; B. S. Manjunath (MILCOM, 2021)

OMD: Orthogonal Malware Detection using Audio, Image, and Static Features. - Lakshmanan Nataraj; Tajuddin Manhar Mohammed; Tejaswi Nanjundaswamy; Satish Chikkagoudar; Shivkumar Chandrasekaran; B. S. Manjunath (MILCOM, 2021)

MalGrid: Visualization of Binary Features in Large Malware Corpora. - Tajuddin Manhar Mohammed; Lakshmanan Nataraj; Satish Chikkagoudar; Shivkumar Chandrasekaran; B. S. Manjunath (MILCOM, 2022)