Predicting recognition between T cell receptors and epitopes with TCRGP. - Emmi Jokinen; Jani Huuhtanen; Satu Mustjoki; Markus Heinonen; Harri Lähdesmäki (PLoS Comput. Biol., 2021)

TCRconv: predicting recognition between T cell receptors and epitopes using contextualized motifs. - Emmi Jokinen; Alexandru Dumitrescu; Jani Huuhtanen; Vladimir Gligorijevic; Satu Mustjoki; Richard Bonneau; Markus Heinonen; Harri Lähdesmäki (Bioinform., 2023)

EPIC-TRACE: predicting TCR binding to unseen epitopes using attention and contextualized embeddings. - Dani Korpela; Emmi Jokinen; Alexandru Dumitrescu; Jani Huuhtanen; Satu Mustjoki; Harri Lähdesmäki (Bioinform., 2023)