BorreliaBase: a phylogeny-centered browser of Borrelia genomes. - Lia Di; Pedro E. Pagan; Daniel Packer; Che L. Martin; Saymon Akther; Girish Ramrattan; Emmanuel F. Mongodin; Claire M. Fraser; Steven E. Schutzer; Benjamin J. Luft; Sherwood R. Casjens; Wei-Gang Qiu (BMC Bioinform., 2014)

BpWrapper: BioPerl-based sequence and tree utilities for rapid prototyping of bioinformatics pipelines. - Yözen Hernández; Rocky Bernstein; Pedro E. Pagan; Levy Vargas; William McCaig; Girish Ramrattan; Saymon Akther; Amanda Larracuente; Lia Di; Filipe G. Vieira; Wei-Gang Qiu (BMC Bioinform., 2018)

Genomic Insights into Mechanisms of Microbial Evolution and Evolution-inspired Strategies to Combat Pathogen Diversity. - Saymon Akther (2022)