Integrated Feasibility Experiment for Bio-Security: IFE-Bio, A TIDES Demonstration. - Lynette Hirschman; Kris Concepcion; Laurie E. Damianos; David Day; John Delmore; Lisa Ferro; John Griffith; John C. Henderson; Jeffrey L. Kurtz; Inderjeet Mani; Scott A. Mardis; Tom McEntee; et al. (HLT, 2001)

Qanda and the Catalyst Architecture. - Pranav Anand; David Anderson; John D. Burger; John Griffith; Marc Light; Scott A. Mardis; Alexander A. Morgan (TREC, 2001)

MITRE's Qanda at TREC-11. - John D. Burger; Lisa Ferro; Warren R. Greiff; John C. Henderson; Scott A. Mardis; Alexander A. Morgan; Marc Light (TREC, 2002)

Software Architectures for Advanced QA. - Eric Nyberg; John D. Burger; Scott A. Mardis; David A. Ferrucci (New Directions in Question Answering, 2004)

Research Paper: Rapidly Retargetable Approaches to De-identification in Medical Records. - Ben Wellner; Matt Huyck; Scott A. Mardis; John S. Aberdeen; Alexander A. Morgan; Leonid Peshkin; Alexander S. Yeh; Janet Hitzeman; Lynette Hirschman (J. Am. Medical Informatics Assoc., 2007)

SpatialML: annotation scheme, resources, and evaluation. - Inderjeet Mani; Christy Doran; Dave Harris; Janet Hitzeman; Rob Quimby; Justin Richer; Ben Wellner; Scott A. Mardis; Seamus Clancy (Lang. Resour. Evaluation, 2010)

An Overview of BioCreative II.5. - Florian Leitner; Scott A. Mardis; Martin Krallinger; Gianni Cesareni; Lynette Hirschman; Alfonso Valencia (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

Nephele: genotyping via complete composition vectors and MapReduce. - Marc E. Colosimo; Matthew W. Peterson; Scott A. Mardis; Lynette Hirschman (Source Code Biol. Medicine, 2011)