Picopore: A tool for reducing the storage size of Oxford Nanopore Technologies datasets without loss of functionality. - Scott Gigante (F1000Research, 2017)

Modeling Dynamics with Deep Transition-Learning Networks. - David van Dijk; Scott Gigante; Alexander Strzalkowski; Guy Wolf; Smita Krishnaswamy (CoRR, 2018)

Visualizing the PHATE of Neural Networks. - Scott Gigante; Adam S. Charles; Smita Krishnaswamy; Gal Mishne (NeurIPS, 2019)

Compressed Diffusion. - Scott Gigante; Jay S. Stanley III; Ngan Vu; David van Dijk; Kevin R. Moon; Guy Wolf; Smita Krishnaswamy (CoRR, 2019)

Harmonic Alignment. - Jay S. Stanley III; Scott Gigante; Guy Wolf; Smita Krishnaswamy (SDM, 2020)

SystemMatch: optimizing preclinical drug models to human clinical outcomes via generative latent-space matching. - Scott Gigante; Varsha G. Raghavan; Amanda M. Robinson; Robert A. Barton; Adeeb H. Rahman; Drausin F. Wulsin; Jacques Banchereau; Noam Solomon; Luis F. Voloch; Fabian J. Theis (CoRR, 2022)