Steady-State Kinetic Modeling Constrains Cellular Resting States and Dynamic Behavior. - Jeremy E. Purvis; Ravi Radhakrishnan; Scott L. Diamond (PLoS Comput. Biol., 2009)

Molecular Docking of Cathepsin L Inhibitors in the Binding Site of Papain. - Mary Pat Beavers; Michael C. Myers; Parag P. Shah; Jeremy E. Purvis; Scott L. Diamond; Barry S. Cooperman; Donna M. Huryn; Amos B. Smith III (J. Chem. Inf. Model., 2010)

Systems Biology of Coagulation Initiation: Kinetics of Thrombin Generation in Resting and Activated Human Blood. - Manash S. Chatterjee; William S. Denney; Huiyan Jing; Scott L. Diamond (PLoS Comput. Biol., 2010)

A Human Platelet Calcium Calculator Trained by Pairwise Agonist Scanning. - Mei Yan Lee; Scott L. Diamond (PLoS Comput. Biol., 2015)

A parallel fluid-solid coupling model using LAMMPS and Palabos based on the immersed boundary method. - Jifu Tan; Talid Sinno; Scott L. Diamond (J. Comput. Sci., 2018)

Reduced model to predict thrombin and fibrin during thrombosis on collagen/tissue factor under venous flow: Roles of γ'-fibrin and factor XIa. - Jason Chen; Scott L. Diamond (PLoS Comput. Biol., 2019)

A three-dimensional multiscale model for the prediction of thrombus growth under flow with single-platelet resolution. - Kaushik N. Shankar; Yiyuan Zhang; Talid Sinno; Scott L. Diamond (PLoS Comput. Biol., 2022)