Academic Podcasting: Quality Media Delivery. - Jacob S. Tripp; Scott L. DuVall; Derek L. Cowan; Aaron W. C. Kamauu (AMIA, 2006)

Translating the IHE Teaching File and Clinical Trial Export (TCE) Profile Document Templates into Functional DICOM Structured Report Objects. - Aaron W. C. Kamauu; Scott L. DuVall; Andrew P. Liimatta; Richard H. Wiggins III; David E. Avrin (J. Digit. Imaging, 2008)

Using Applet-Servlet Communication for Optimizing Window, Level and Crop for DICOM to JPEG Conversion. - Aaron W. C. Kamauu; Scott L. DuVall; Richard H. Wiggins III; David E. Avrin (J. Digit. Imaging, 2008)

Using Java to Generate Globally Unique Identifiers for DICOM Objects. - Aaron W. C. Kamauu; Scott L. DuVall; David E. Avrin (J. Digit. Imaging, 2009)

Creation and Usability Testing of a Web-Based Pre-Scanning Radiology Patient Safety and History Questionnaire Set. - Tracy J. Robinson; Scott L. DuVall; Richard H. Wiggins III (J. Digit. Imaging, 2009)

Exploiting tag and word correlations for improved webpage clustering. - Anusua Trivedi; Piyush Rai; Scott L. DuVall; Hal Daumé III (SMUC@CIKM, 2010)

The Role of Coreference Resolution in Outbreak Reporting and Detection. - Scott L. DuVall; Jeffrey P. Ferraro (HICSS, 2010)

The Impact of a Growing Minority Population on Identification of Duplicate Records in an Enterprise Data Warehouse. - Scott L. DuVall; Alison M. Fraser; Richard A. Kerber; Geraldine P. Mineau; Alun Thomas (MedInfo, 2010)

Extending the Fellegi-Sunter probabilistic record linkage method for approximate field comparators. - Scott L. DuVall; Richard A. Kerber; Alun Thomas (J. Biomed. Informatics, 2010)

An Interface for Rapid Natural Language Processing Development in UIMA. - Balaji Soundrarajan; Thomas Ginter; Scott L. DuVall (ACL (System Demonstrations), 2011)

Creating Reusable Annotated Corpora with the Clinical Document Architecture. - Scott L. DuVall; Keith W. Boone; Adi V. Gundlapalli; Brett R. South; Shuying Shen; Jonathan R. Nebeker; Leonard W. D'Avolio; Matthew H. Samore (HICSS, 2011)

Active Supervised Domain Adaptation. - Avishek Saha; Piyush Rai; Hal Daumé III; Suresh Venkatasubramanian; Scott L. DuVall (ECML/PKDD (3), 2011)

2010 i2b2/VA challenge on concepts, assertions, and relations in clinical text. - Özlem Uzuner; Brett R. South; Shuying Shen; Scott L. DuVall (J. Am. Medical Informatics Assoc., 2011)

Creation and Storage of Standards-based Pre-scanning Patient Questionnaires in PACS as DICOM Objects. - Tracy J. Robinson; Scott L. DuVall; Richard H. Wiggins III (J. Digit. Imaging, 2011)

JMX Analysis Module: Multi-thread aggregate NLP performance monitoring. - Ryan Cornia; Olga V. Patterson; Scott L. DuVall (AMIA, 2012)

CASPR: Friendly Annotation Management. - Tyler Forbush; Brad Adams; Shuying Shen; Brett R. South; Jonathan R. Nebeker; Scott L. DuVall (AMIA, 2012)

Project Management and Coordination: Selecting Communication Tools for Multi-Site, Multidisciplinary Collaboration. - James Potter; Corinne Halls; Beniel Malohi; Scott L. DuVall (AMIA, 2012)

Evaluation and Visualization of Human Annotator Learning Patterns. - Ying Suo; Shuying Shen; Scott L. DuVall; Özlem Uzuner; Brett R. South (AMIA, 2012)

A Prototype Tool Set to Support Machine-Assisted Annotation. - Brett R. South; Shuying Shen; Jianwei Leng; Tyler Forbush; Scott L. DuVall; Wendy W. Chapman (BioNLP@HLT-NAACL, 2012)

Identifying Provider Counseling Practices Using Natural Language Processing: Gout Example. - Olga V. Patterson; Gail S. Kerr; J. Steuart Richards; Carl A. Nunziato; David D. Maron; Richard L. Amdur; Scott L. DuVall (HISB, 2012)

Evaluation of record linkage between a large healthcare provider and the Utah Population Database. - Scott L. DuVall; Alison M. Fraser; Kerry Rowe; Alun Thomas; Geraldine P. Mineau (J. Am. Medical Informatics Assoc., 2012)

Automated extraction of ejection fraction for quality measurement using regular expressions in Unstructured Information Management Architecture (UIMA) for heart failure. - Jennifer H. Garvin; Scott L. DuVall; Brett R. South; Bruce E. Bray; Daniel Bolton; Julia Heavirland; Steve Pickard; Paul Heidenreich; Shuying Shen; Charlene R. Weir; Matthew H. Samore; Mary K. Goldstein (J. Am. Medical Informatics Assoc., 2012)

Identification of methicillin-resistant Staphylococcus aureus within the Nation's Veterans Affairs Medical Centers using natural language processing. - Makoto Jones; Scott L. DuVall; Joshua Spuhl; Matthew H. Samore; Christopher D. Nielson; Michael A. Rubin (BMC Medical Informatics Decis. Mak., 2012)

Leveraging Social Bookmarks from Partially Tagged Corpus for Improved Web Page Clustering. - Anusua Trivedi; Piyush Rai; Hal Daumé III; Scott L. DuVall (ACM Trans. Intell. Syst. Technol., 2012)

Using Natural Language Processing on the Free Text of Clinical Documents to Screen for Evidence of Homelessness Among US Veterans. - Adi V. Gundlapalli; Marjorie Carter; Miland N. Palmer; Thomas Ginter; Andrew Redd; Steve Pickard; Shuying Shen; Brett R. South; Guy Divita; Scott L. DuVall; Thien M. Nguyen; Leonard W. D'Avolio; et al. (AMIA, 2013)

An Integrated Approach to Chart Review and Annotation. - Tyler Forbush; Shuying Shen; Scott L. DuVall (MedInfo, 2013)

Building a Common Pipeline for Rule-based Document Classification. - Olga V. Patterson; Thomas Ginter; Scott L. DuVall (MedInfo, 2013)

Improving performance of natural language processing part-of-speech tagging on clinical narratives through domain adaptation. - Jeffrey P. Ferraro; Hal Daumé III; Scott L. DuVall; Wendy Webber Chapman; Henk Harkema; Peter J. Haug (J. Am. Medical Informatics Assoc., 2013)

Rapid NLP Development with Leo. - Ryan Cornia; Olga V. Patterson; Thomas Ginter; Scott L. DuVall (AMIA, 2014)

Sophia: An Expedient UMLS Concept Extraction Annotator. - Guy Divita; Qing T. Zeng; Adi V. Gundlapalli; Scott L. DuVall; Jonathan R. Nebeker; Matthew H. Samore (AMIA, 2014)

Check it with Chex: A Validation Tool for Iterative NLP Development. - Scott L. DuVall; Ryan Cornia; Tyler B. Forbush; Corinne Halls; Olga V. Patterson (AMIA, 2014)

Machine Learning Made Easy with Sherlock. - Thomas Ginter; Olga V. Patterson; Ryan Cornia; Scott L. DuVall (AMIA, 2014)

Automatic Engine for Mapping Mycobacteriology Reports to SNOMED-CT. - Olga V. Patterson; Scott D. Nelson; Makoto L. Jones; Kimberly Findley; Kevin L. Winthrop; Kevin P. Fennelly; Scott L. DuVall (AMIA, 2014)

Knowledge Base Acquisition For Rare Concepts Using Manual Bootstrapping. - Patrick R. Alba; Scott L. DuVall; Joanne LaFleur; Adam Bress; Olga V. Patterson (AMIA, 2015)

Transforming the National Department of Veterans Affairs Data Warehouse to the OMOP Common Data Model. - Fern FitzHenry; Jesse Brannen; Jason N. Denton; Jonathan R. Nebeker; Scott L. DuVall; Freneka F. Minter; Jeffrey Scehnet; Brian C. Sauer; Lucila Ohno-Machado; Michael E. Matheny (AMIA, 2015)

Improving Radiology Procedure Identification for Inferior Vena Cava (IVC) Filters using EHR Text. - Dalia A. Mobarek; Najeebah Bade; Benjamin Viernes; Patricia Nechodom; Frederick R. Rickles; Scott L. DuVall (AMIA, 2015)

Building custom lexicon for a large number of related concepts using templates. - Olga V. Patterson; Matthew Freiberg; Scott L. DuVall (AMIA, 2015)

Classifying the Indication for Colonoscopy Procedures: A Comparison of NLP Approaches in a Diverse National Healthcare System. - Olga V. Patterson; Tyler B. Forbush; Sameer D. Saini; Stephanie E. Moser; Scott L. DuVall (MedInfo, 2015)

Extraction of Vital Signs from Clinical Notes. - Olga V. Patterson; Makoto Jones; Yiwen Yao; Benjamin Viernes; Patrick R. Alba; Theodore J. Iwashyna; Scott L. DuVall (MedInfo, 2015)

The Super Annotator: A Method of Semi-Automated Rare Event Identification for Large Clinical Data Sets. - Patrick R. Alba; Olga V. Patterson; Benjamin Viernes; Daniel W. Denhalter; Nicole Bailey; Andrew Wilson; Aaron W. C. Kamauu; Scott L. DuVall (AMIA, 2016)

Large Scale Clinical Text Processing and Process Optimization. - Scott L. DuVall; Patrick R. Alba; Olga V. Patterson (AMIA, 2016)

VIP: A Framework for Mining Clinical Concepts Using Knowledge Author Ontologies and Apache UIMA. - Thomas Ginter; Lalindra De Silva; Olga V. Patterson; William Scuba; Wendy W. Chapman; Scott L. DuVall (AMIA, 2016)

An Introduction to Natural Language Processing Methods in Clinical Research. - Olga V. Patterson; Patrick R. Alba; Scott L. DuVall (AMIA, 2016)

Evaluation of UMLS Term Coverage for Echocardiogram Measures. - Olga V. Patterson; Matthew Freiberg; Cynthia Brandt; Scott L. DuVall (AMIA, 2016)

Automatic Extraction of Maximum and Recommended Drug Dosage Information from DailyMed Database. - Lalindra De Silva; Olga V. Patterson; Scott L. DuVall (AMIA, 2016)

Pathology Information Extraction in Bladder Cancer Surveillance. - Patrick R. Alba; Scott L. DuVall; Terri Elizabeth Workman; Florian Schroeck; Olga V. Patterson (AMIA, 2017)

ProjectFlow: Configurable Clinical Trial Management with Enterprise Data Integration and Point-of-Care Study Support. - Ryan C. Cornia; Nilla Majahalme; Danne C. Elbers; Svitlana Dipietro; Brian R. Ivie; Brad Adams; Ramana Seerapu; Valmeek Kudesia; Scott L. DuVall (AMIA, 2017)

Improving the Quality of Clinical Data Extracted from Text. - Daniel W. Denhalter; Olga V. Patterson; Brian D. Robison; Scott L. DuVall (AMIA, 2017)

For the Common Good: Sharing Data Extracted from Text. - Olga V. Patterson; Scott L. DuVall (AMIA, 2017)

Interactive Visualization and Exploration of Patient Progression in a Hospital Setting. - Wathsala Widanagamaachchi; Yarden Livnat; Peer-Timo Bremer; Scott L. DuVall; Valerio Pascucci (AMIA, 2017)

Clinical decisions surrounding genomic and proteomic testing among United States veterans treated for lung cancer within the Veterans Health Administration. - Olga Efimova; Brygida Berse; Daniel W. Denhalter; Scott L. DuVall; Kelly K. Filipski; Michael Icardi; Michael J. Kelley; Julie A. Lynch (BMC Medical Informatics Decis. Mak., 2017)

Ankle Brachial Index Extraction System. - Patrick R. Alba; Scott L. DuVall; Daniel Norvell; Kathryn P. Moore; Joseph M. Czerniecki; Olga V. Patterson (AMIA, 2018)

A User-Friendly Interface for Concept Dictionary Expansion Using Word Embeddings and SNOMED-CT. - Alec B. Chapman; Patrick R. Alba; Brian T. Bucher; Scott L. DuVall; Olga V. Patterson (AMIA, 2018)

The Department of Defense (DoD) and Department of Veterans Affairs (VA) Infrastructure for Clinical Intelligence (DaVINCI). - Scott L. DuVall; Michael E. Matheny; Ildar R. Ibragimov; Trey D. Oats; Jay N. Tucker; Brett R. South; Augie Turano; Hamid Saoudian; Casey Kangas; Keith D. Hofmann; Wendy Funk; Chris Nichols; et al. (AMIA, 2018)

Towards intuitive NLP: Interactive system for machine teaching. - Olga V. Patterson; Lalindra De Silva; Brad Adams; Ryan Cornia; Thomas Ginter; Susan L. Zickmund; Scott L. DuVall (AMIA, 2018)

Fast and Accurate Adverse Drug Event labeling without a GPU. - Kelly S. Peterson; Alec B. Chapman; Patrick R. Alba; Scott L. DuVall; Olga V. Patterson (AMIA, 2018)

Flipping the Model for Biomedical Informatics Research. - Brett R. South; Kristine W. Lynch; Michael E. Matheny; Julie A. Lynch; Olga Efimova; Catherine Chanfreau-Coffinier; Olga V. Patterson; Benjamin Viernes; Scott L. DuVall (AMIA, 2018)

Hybrid system for adverse drug event detection. - Alec B. Chapman; Kelly S. Peterson; Patrick R. Alba; Scott L. DuVall; Olga V. Patterson (Medication and Adverse Drug Event Detection, 2018)

Developing Synthetic VA Healthcare Data in OMOP CDM Model. - Jiantao Bian; Hamid Saoudian; Brett R. South; Kristine E. Lynch; Benjamin Viernes; Michael E. Matheny; Scott L. DuVall (AMIA, 2019)

Automatic Methods to Extract Prescription Status Quality Measures from Unstructured Health Records. - Patrick R. Alba; Olga V. Patterson; Joshua S. Richman; Scott L. DuVall (MedInfo, 2019)

A Tale of Two Databases: The DoD and VA Infrastructure for Clinical Intelligence (DaVINCI). - Scott L. DuVall; Michael E. Matheny; Ildar R. Ibragimov; Trey D. Oats; Jay N. Tucker; Brett R. South; Augie Turano; Hamid Saoudian; Casey Kangas; Keith D. Hofmann; Wendy Funk; Chris Nichols; et al. (MedInfo, 2019)

Using Enriched Samples for Semi-Automated Vocabulary Expansion to Identify Rare Events in Clinical Text: Sexual Orientation as a Use Case. - Kristine E. Lynch; Patrick R. Alba; Benjamin Viernes; Scott L. DuVall (MedInfo, 2019)

Characterizing VA Users with the OMOP Common Data Model. - Benjamin Viernes; Kristine E. Lynch; Brett R. South; Gregorio Coronado; Scott L. DuVall (MedInfo, 2019)

Incrementally Transforming Electronic Medical Records into the Observational Medical Outcomes Partnership Common Data Model: A Multidimensional Quality Assurance Approach. - Kristine E. Lynch; Stephen A. Deppen; Scott L. DuVall; Benjamin Viernes; Aize Cao; Daniel Park; Elizabeth Hanchrow; Kushan Hewa; Peter Greaves; Michael E. Matheny (Appl. Clin. Inform., 2019)

Removing barriers to clinical text processing with MedSpaCy. - Hannah Eyre; Olga V. Patterson; Jianlin Shi; Kelly S. Peterson; Alec B. Chapman; Patrick R. Alba; Scott L. DuVall (AMIA, 2020)

Linking Polyps to Jars: information loss across colonoscopy and pathology reports. - Olga V. Patterson; Samir Gupta; Andrew Gawron; Tonya Kaltenbach; Ranier Bustamante; Lin Liu; Daniel W. Denhalter; Ashley Earles; Scott L. DuVall (AMIA, 2020)

COVID-19 TestNorm: A tool to normalize COVID-19 testing names to LOINC codes. - Xiao Dong; Jianfu Li; Ekin Soysal; Jiang Bian 001; Scott L. DuVall; Elizabeth Hanchrow; Hongfang Liu; Kristine E. Lynch; Michael E. Matheny; Karthik Natarajan; Lucila Ohno-Machado; Serguei Pakhomov; et al. (J. Am. Medical Informatics Assoc., 2020)

Challenges of comprehensive automatic coding of presenting complaints. - Annie E. Bowles; Hannah Eyre; Scott L. DuVall; Olga V. Patterson (AMIA, 2021)

Launching into clinical space with medspaCy: a new clinical text processing toolkit in Python. - Hannah Eyre; Alec B. Chapman; Kelly S. Peterson; Jianlin Shi; Patrick R. Alba; Makoto M. Jones; Tamara L. Box; Scott L. DuVall; Olga V. Patterson (AMIA, 2021)

From Emergency Department to Admission: mapping reasons for visit and admit diagnosis using Natural Language Processing. - Olga V. Patterson; Hannah Eyre; Kelly S. Peterson; Scott L. DuVall (AMIA, 2021)

From Rules to Machine Learning: Upgrading Aging Clinical NLP Systems. - Hannah Eyre; Scott L. DuVall; Olga V. Patterson (AMIA, 2022)

Identifying Menopausal Status with Natural Language Processing. - Hannah Eyre; Kristine W. Lynch; Carolyn Gibson; Scott L. DuVall; Olga V. Patterson (AMIA, 2022)

Manual Chart Review Train and Inter-Annotator Agreement Plan for a COVID-19 Disease Association Study. - Brent D. Hill; Kristine W. Lynch; Scott L. DuVall (AMIA, 2022)

Comprehensive Mapping of Presenting Symptoms in the Emergency Department and Inpatient Setting. - Christopher R. Wilson; Annie E. Bowles; Hannah Eyre; Scott L. DuVall; Olga V. Patterson (AMIA, 2022)

Clinician documentation of patient centered care in the electronic health record. - Jorie M. Butler; Bryan Smith Gibson; Olga V. Patterson; Laura J. Damschroder; Corrinne H. Halls; Daniel W. Denhalter; Matthew H. Samore; Haojia Li; Yue Zhang; Scott L. DuVall (BMC Medical Informatics Decis. Mak., 2022)

Development of a Natural Language Processing System to Identify Clinical Documentation of Electronic Cigarette Use. - Patrick R. Alba; Qiwei Gan; Mengke Hu; Shu-Hong Zhu; Scott E. Sherman; Scott L. DuVall; Mike Conway (MedInfo, 2023)

An NLP Framework for the Extraction of Concept Measurements from Radiology and Pathology Notes. - Annie E. Bowles; Cris Perez; Anil Vachani; Jennifer Steltz; Brent Rose; Alex K. Bryant; Hannah Eyre; Scott L. DuVall; Julie A. Lynch; Patrick R. Alba (MedInfo, 2023)

Toward Real-World Reproducibility: Verifying Value Sets for Clinical Research. - Scott L. DuVall; Craig G. Parker; Amanda R. Shields; Patrick R. Alba; Julie A. Lynch; Michael E. Matheny; Aaron W. C. Kamauu (MedInfo, 2023)

Blockchain-enabled immutable, distributed, and highly available clinical research activity logging system for federated COVID-19 data analysis from multiple institutions. - Tsung-Ting Kuo; Anh Pham; Maxim E. Edelson; Jihoon Kim 001; Jason Chan; Yash Gupta; Lucila Ohno-Machado; David M. Anderson; Chandrasekar Balacha; Tyler Bath; Sally L. Baxter; Andrea Becker-Pennrich; et al. (J. Am. Medical Informatics Assoc., 2023)

A deep learning approach for medication disposition and corresponding attributes extraction. - Qiwei Gan; Mengke Hu; Kelly S. Peterson; Hannah Eyre; Patrick R. Alba; Annie E. Bowles; Johnathan C. Stanley; Scott L. DuVall; Jianlin Shi (J. Biomed. Informatics, 2023)

Reproducible variability: assessing investigator discordance across 9 research teams attempting to reproduce the same observational study. - Anna Ostropolets; Yasser Albogami; Mitchell Conover; Juan M. Banda; William A. Baumgartner Jr.; Clair Blacketer; Priyamvada Desai; Scott L. DuVall; Stephen P. Fortin; James P. Gilbert; Asieh Golozar; Joshua Ide; et al. (J. Am. Medical Informatics Assoc., 2023)

Unlocking efficiency in real-world collaborative studies: a multi-site international study with one-shot lossless GLMM algorithm. - Jiayi Tong; Jenna Marie Reps; Chongliang Luo; Yiwen Lu; Lu Li; Juan Manuel Ramirez-Anguita; Milou T. Brand; Scott L. DuVall; Thomas Falconer; Alex Mayer Fuentes; Xing He 003; Michael E. Matheny; et al. (npj Digit. Medicine, 2025)