MASH Native: a unified solution for native top-down proteomics data processing. - Eli J. Larson; Melissa R. Pergande; Michelle E. Moss; Kalina J. Rossler; R. Kent Wenger; Boris Krichel; Harini Josyer; Jake A. Melby; David S. Roberts; Kyndalanne Pike; Zhuoxin Shi; Hsin-Ju Chan; et al. (Bioinform., 2023)

Ranking antibody binding epitopes and proteins across samples from whole proteome tiled linear peptides. - Sean J. McIlwain; Anna Hoefges; Amy K. Erbe; Paul M. Sondel; Irene M. Ong (Bioinform., 2024)