Analysis of Incrementally Generated Clusters in Biological Networks Using Graph-Theoretic Filters and Ontology Enrichment. - Sean West; Kathryn Dempsey; Sanjukta Bhowmick; Hesham H. Ali (ICDM Workshops, 2013)

On the impact of data integration and edge enrichment in mining significant signals from biological networks. - Sean West; Hesham H. Ali (BCB, 2014)

On the Impact of Granularity in Extracting Knowledge from Bioinformatics Data. - Sean West; Hesham H. Ali (BIOINFORMATICS, 2016)

Sensitivity Analysis of Granularity Levels in Complex Biological Networks. - Sean West; Hesham H. Ali (BIOSTEC (Selected Papers), 2016)

Granularity-aware fusion of biological networks for information extraction. - Sean West; Hesham H. Ali (BIBM, 2017)

Uncovering and characterizing splice variants associated with survival in lung cancer patients. - Sean West; Sushil Kumar; Surinder K. Batra; Hesham Ali 001; Dario Ghersi (PLoS Comput. Biol., 2019)

NEEP: null empirically estimated p-values for high-throughput molecular survival analysis. - Sean West; Hesham Ali 001; Dario Ghersi (J. Open Source Softw., 2020)