We have met the enemy and he is us. - Matt Bishop; Sophie Engle; Sean Peisert; Sean Whalen; Carrie Gates (NSPW, 2008)

Case Studies of an Insider Framework. - Matt Bishop; Sophie Engle; Sean Peisert; Sean Whalen; Carrie Gates (HICSS, 2009)

Hidden Markov Models for Automated Protocol Learning. - Sean Whalen; Matt Bishop; James P. Crutchfield (SecureComm, 2010)

A Risk Management Approach to the "Insider Threat". - Matt Bishop; Sophie Engle; Deborah A. Frincke; Carrie Gates; Frank L. Greitzer; Sean Peisert; Sean Whalen (Insider Threats in Cyber Security, 2010)

Visualizing distributed memory computations with hive plots. - Sophie Engle; Sean Whalen (VizSEC, 2012)

Network-theoretic classification of parallel computation patterns. - Sean Whalen; Sophie Engle; Sean Peisert; Matt Bishop (Int. J. High Perform. Comput. Appl., 2012)

Structural Drift: The Population Dynamics of Sequential Learning. - James P. Crutchfield; Sean Whalen (PLoS Comput. Biol., 2012)

A Taxonomy of Buffer Overflow Characteristics. - Matt Bishop; Sophie Engle; Damien Howard; Sean Whalen (IEEE Trans. Dependable Secur. Comput., 2012)

A Comparative Analysis of Ensemble Classifiers: Case Studies in Genomics. - Sean Whalen; Gaurav Pandey (ICDM, 2013)

Dynamic Recombination of Evolving Guitar Sounds (DREGS): A Genetic Algorithm Approach to Guitar Synthesizer Control. - Timothy M. Walker; Sean Whalen (ISM, 2013)

Multiclass classification of distributed memory parallel computations. - Sean Whalen; Sean Peisert; Matt Bishop (Pattern Recognit. Lett., 2013)

Model Aggregation for Distributed Content Anomaly Detection. - Sean Whalen; Nathaniel Boggs; Salvatore J. Stolfo (AISec@CCS, 2014)

Unboxing cluster heatmaps. - Sophie Engle; Sean Whalen; Alark Joshi; Katherine S. Pollard (BMC Bioinform., 2017)