Modeling of Cell-to-Cell Communication Processes with Petri Nets Using the Example of Quorum Sensing. - Sebastian Janowski; Benjamin Kormeier; Thoralf Töpel; Klaus Hippe; Ralf Hofestädt; Nils Willassen; Rafael Friesen; Sebastian Rubert; Daniela Borck; Peik Haugen; Ming Chen 005 (Silico Biol., 2010)

CELLmicrocosmos 2.2: advancements and applications in modeling of three-dimensional PDB membranes. - Björn Sommer 001; Tim Dingersen; Sebastian E. Schneider; Sebastian Rubert; Christian Gamroth (J. Cheminformatics, 2010)

Coarse-grained and all-atom MD simulations with Gromacs based on CELLmicrocosmos 2.2 model membranes. - Björn Sommer 001; Tim Dingersen; Christian Gamroth; André J. Heissmann; Gunther Lukat; Ralf Rotzoll; Sebastian Rubert; Alexander Schäfer; Jens Krüger 002 (J. Cheminformatics, 2011)

CELLmicrocosmos 2.2 MembraneEditor: A Modular Interactive Shape-Based Software Approach To Solve Heterogeneous Membrane Packing Problems. - Björn Sommer 001; Tim Dingersen; Christian Gamroth; Sebastian E. Schneider; Sebastian Rubert; Jens Krüger 002; Karl-Josef Dietz (J. Chem. Inf. Model., 2011)

The GMX-Plugin for the CELLmicrocosmos MembraneEditor. - Sebastian Rubert; Christian Gamroth; André J. Heissmann; Gunther Lukat; Ralf Rotzoll; Alexander Schäfer; Jens Krüger 002; Björn Sommer 001 (J. Cheminformatics, 2012)