Planning image-guided endovascular interventions: guidewire simulation using shortest path algorithms. - Sebastian Schafer; Vikas Singh; Kenneth R. Hoffmann; Peter B. Noël; Jinhui Xu 001 (Image-Guided Procedures, 2007)

Evaluating Tool-Artery Interaction Force during Endovascular Neurosurgery for Developing Haptic Engine. - Anindita Sengupta; T. Kesavadas; Kenneth R. Hoffmann; Robert E. Baier; Sebastian Schafer (MMVR, 2007)

3D-3D alignment using particle swarm optimization. - Sebastian Schafer; Kenneth R. Hoffmann; Peter B. Noël; Christina L. Bloebaum (Image Processing, 2008)

Reconstruction from a flexible number of projections in cone-beam computed tomography via active shape models. - Peter B. Noël; Jason J. Corso; Jinhui Xu 001; Kenneth R. Hoffmann; Sebastian Schafer; Alan M. Walczak (Image Processing, 2009)

Clinical evaluation of angiographic multiple-view 3D reconstruction. - Peter B. Noël; Kenneth R. Hoffmann; Snehal Kasodekar; Alan M. Walczak; Sebastian Schafer; Jacek Dmochowski (Int. J. Comput. Assist. Radiol. Surg., 2009)

Real-time endovascular guidewire position simulation using shortest path algorithms. - Sebastian Schafer; Vikas Singh; Peter B. Noël; Alan M. Walczak; Jinhui Xu 001; Kenneth R. Hoffmann (Int. J. Comput. Assist. Radiol. Surg., 2009)

GPU-based cone beam computed tomography. - Peter B. Noël; Alan M. Walczak; Jinhui Xu 001; Jason J. Corso; Kenneth R. Hoffmann; Sebastian Schafer (Comput. Methods Programs Biomed., 2010)

High-accuracy 3D image-based registration of endoscopic video to C-arm cone-beam CT for image-guided skull base surgery. - Daniel J. Mirota; Ali Uneri; Sebastian Schafer; Sajendra Nithiananthan; Douglas D. Reh; Gary L. Gallia; Russell H. Taylor; Gregory D. Hager; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2011)

Incorporating tissue excision in deformable image registration: a modified demons algorithm for cone-beam CT-guided surgery. - Sajendra Nithiananthan; Daniel Mirota; Ali Uneri; Sebastian Schafer; Yoshito Otake; J. Webster Stayman; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2011)

Architecture of a high-performance surgical guidance system based on C-arm cone-beam CT: software platform for technical integration and clinical translation. - Ali Uneri; Sebastian Schafer; Daniel Mirota; Sajendra Nithiananthan; Yoshito Otake; Sureerat Reaungamornrat; Jongheun Yoo; J. Webster Stayman; Douglas D. Reh; Gary L. Gallia; A. Jay Khanna; Gregory D. Hager; et al. (Image-Guided Procedures, 2011)

An improved endovascular guidewire position simulation algorithm. - Lei Xu 006; Yong Tian; Xuhui Jin; Jie Chen; Sebastian Schafer; Kenneth R. Hoffmann; Jinhui Xu 001 (ISBI, 2012)

Incorporation of prior knowledge for region of change imaging from sparse scan data in image-guided surgery. - J. Lee; J. Webster Stayman; Yoshito Otake; Sebastian Schafer; Wojciech Zbijewski; Akhil Jay Khanna; Jerry L. Prince; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

Automatic localization of target vertebrae in spine surgery using fast CT-to-fluoroscopy (3D-2D) image registration. - Yoshito Otake; Sebastian Schafer; J. Webster Stayman; Wojciech Zbijewski; Gerhard Kleinszig; Rainer Graumann; Akhil J. Khanna; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

Tracker-on-C for cone-beam CT-guided surgery: evaluation of geometric accuracy and clinical applications. - Sureerat Reaungamornrat; Yoshito Otake; Ali Uneri; Sebastian Schafer; Daniel J. Mirota; Sajendra Nithiananthan; J. Webster Stayman; Akhil Jay Khanna; Douglas D. Reh; Gary L. Gallia; Russell H. Taylor; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

High-performance C-arm cone-beam CT guidance of thoracic surgery. - Sebastian Schafer; Yoshito Otake; Ali Uneri; Daniel J. Mirota; Sajendra Nithiananthan; J. Webster Stayman; Wojciech Zbijewski; Gerhard Kleinszig; Rainer Graumann; Marc S. Sussman; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

Deformable registration of the inflated and deflated lung for cone-beam CT-guided thoracic surgery. - Ali Uneri; Sajendra Nithiananthan; Sebastian Schafer; Yoshito Otake; J. Webster Stayman; Gerhard Kleinszig; Marc S. Sussman; Russell H. Taylor; Jerry L. Prince; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2012)

An on-board surgical tracking and video augmentation system for C-arm image guidance. - Sureerat Reaungamornrat; Yoshito Otake; Ali Uneri; Sebastian Schafer; Daniel Mirota; Sajendra Nithiananthan; J. Webster Stayman; Gerhard Kleinszig; A. Jay Khanna; Russell H. Taylor; Jeffrey H. Siewerdsen (Int. J. Comput. Assist. Radiol. Surg., 2012)

TREK: an integrated system architecture for intraoperative cone-beam CT-guided surgery. - Ali Uneri; Sebastian Schafer; Daniel Mirota; Sajendra Nithiananthan; Yoshito Otake; Russell Highsmith Taylor; Gary L. Gallia; A. Jay Khanna; S. Lee; Douglas D. Reh; Jeffrey H. Siewerdsen (Int. J. Comput. Assist. Radiol. Surg., 2012)

Deformable image registration with content mismatch: a demons variant to account for added material and surgical devices in the target image. - Sajendra Nithiananthan; Ali Uneri; Sebastian Schafer; Daniel Mirota; Yoshito Otake; J. Webster Stayman; Wojciech Zbijewski; Akhil Jay Khanna; Douglas D. Reh; Gary L. Gallia; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2013)

A gaussian mixture + demons deformable registration method for cone-beam CT-guided robotic transoral base-of-tongue surgery. - Sureerat Reaungamornrat; Wen P. Liu; Sebastian Schafer; Yoshito Otake; Sajendra Nithiananthan; Ali Uneri; Jeremy D. Richmon; Jonathan M. Sorger; Jeffrey H. Siewerdsen; Russell H. Taylor (Image-Guided Procedures, 2013)

Intraoperative imaging for patient safety and QA: detection of intracranial hemorrhage using C-arm cone-beam CT. - Sebastian Schafer; Adam S. Wang; Yoshito Otake; J. Webster Stayman; Wojciech Zbijewski; Gerhard Kleinszig; Xuewei Xia; Gary L. Gallia; Jeffrey H. Siewerdsen (Image-Guided Procedures, 2013)

An electromagnetic "Tracker-in-Table" configuration for X-ray fluoroscopy and cone-beam CT-guided surgery. - Jongheun Yoo; Sebastian Schafer; Ali Uneri; Yoshito Otake; A. Jay Khanna; Jeffrey H. Siewerdsen (Int. J. Comput. Assist. Radiol. Surg., 2013)

Evaluation of a System for High-Accuracy 3D Image-Based Registration of Endoscopic Video to C-Arm Cone-Beam CT for Image-Guided Skull Base Surgery. - Daniel Mirota; Ali Uneri; Sebastian Schafer; Sajendra Nithiananthan; Douglas D. Reh; Masaru Ishii; Gary L. Gallia; Russell H. Taylor; Gregory D. Hager; Jeffrey H. Siewerdsen (IEEE Trans. Medical Imaging, 2013)

histoneHMM: Differential analysis of histone modifications with broad genomic footprints. - Matthias Heinig; Maria Colomé-Tatché; Aaron Taudt; Carola Rintisch; Sebastian Schafer; Michal Pravenec; Norbert Hübner; Martin Vingron; Frank Johannes (BMC Bioinform., 2015)

Biplane reconstruction and visualization of virtual endoscopic and fluoroscopic views for interventional device navigation. - Martin G. Wagner; Charles M. Strother; Sebastian Schafer; Charles A. Mistretta (Image-Guided Procedures, 2016)

Brain Parenchyma and Vessel Separation in 3D Digital Subtraction Angiography Images. - Jürgen Endres; Christopher Rohkohl; Kevin Royalty; Sebastian Schafer; Andreas K. Maier; Arnd Dörfler; Markus Kowarschik (Bildverarbeitung für die Medizin, 2017)

Precision blood flow measurements in vascular networks with conservation constraints. - Gabe Shaughnessy; Carson Hoffman; Sebastian Schafer; Paul F. Laeseke; Charles A. Mistretta; Charles M. Strother (Image-Guided Procedures, 2018)

A real-time system for prosthetic valve tracking. - Martin G. Wagner; Lindsay E. Bodart; Sebastian Schafer; Amish N. Raval; Michael A. Speidel (Image-Guided Procedures, 2018)

Feasibility of intra-acquisition motion correction for 4D DSA reconstruction for applications in the thorax and abdomen. - Martin G. Wagner; Paul F. Laeseke; Colin Harari; Sebastian Schafer; Michael A. Speidel; Charles A. Mistretta (Image Processing, 2018)

Prototype system for interventional dual-energy subtraction angiography. - Michael A. Speidel; Christiane S. Burton; Ethan P. Nikolau; Sebastian Schafer; Paul F. Laeseke (Image-Guided Procedures, 2019)

Method for 3D navigation of airways on a single C-arm using multi-sweep limited angle acquisition and frame-by-frame device reconstruction. - Martin G. Wagner; Sarvesh Periyasamy; Sebastian Schafer; Paul F. Laeseke; Michael A. Speidel (Image-Guided Procedures, 2021)

Development of an Integrated C-Arm Interventional Imaging System With a Strip Photon Counting Detector and a Flat Panel Detector. - Xu Ji; Mang Feng; Kevin Treb; Ran Zhang 009; Sebastian Schafer; Ke Li 033 (IEEE Trans. Medical Imaging, 2021)