Suffix-tree analyser (STAN): looking for nucleotidic and peptidic patterns in chromosomes. - Jacques Nicolas; Patrick Durand; Grégory Ranchy; Sébastien Tempel; Anne-Sophie Valin (Bioinform., 2005)

Domain organization within repeated DNA sequences: application to the study of a family of transposable elements. - Sébastien Tempel; Mathieu Giraud; Dominique Lavenier; Israël-César Lerman; Anne-Sophie Valin; Ivan Couée; Abdelhak El Amrani; Jacques Nicolas (Bioinform., 2006)

Dynamique des hélitrons dans le genome d'Arabidopsis thaliana : développement de nouvelles stratégies d'analyse des éléments transposables. (Dynamics of transposable elements in the genome of Arabidopsis thaliana: development of new strategies for the analysis of transposable elements). - Sébastien Tempel (2007)

VisualRepbase: an interface for the study of occurrences of transposable element families. - Sébastien Tempel; Matthew Jurka; Jerzy Jurka (BMC Bioinform., 2008)

ModuleOrganizer: detecting modules in families of transposable elements. - Sébastien Tempel; Christine Rousseau; Fariza Tahi; Jacques Nicolas (BMC Bioinform., 2010)

ncRNAclassifier: a tool for detection and classification of transposable element sequences in RNA hairpins. - Sébastien Tempel; Nicolas Pollet; Fariza Tahi (BMC Bioinform., 2012)

miRNAFold: a web server for fast miRNA precursor prediction in genomes. - Christophe Tav; Sébastien Tempel; Laurent Poligny; Fariza Tahi (Nucleic Acids Res., 2016)