Generalised RBF Networks Trained Using an IBL Algorithm for Mining Symbolic Data. - Liviu Vladutu; Stergios Papadimitriou; Seferina Mavroudi; Anastasios Bezerianos (PAKDD, 2001)

A Probabilistic Symmetric Encryption Scheme for Very Fast Secure Communication Based on Chaotic Systems of difference equations. - Stergios Papadimitriou; Tassos Bountis; Seferina Mavroudi; Anastasios Bezerianos (Int. J. Bifurc. Chaos, 2001)

Ischemia detection with a self-organizing map supplemented by supervised learning. - Stergios Papadimitriou; Seferina Mavroudi; Liviu Vladutu; Anastasios Bezerianos (IEEE Trans. Neural Networks, 2001)

Generalized Radial Basis Function Networks Trained with Instance Based Learning for Data Mining of Symbolic Data. - Stergios Papadimitriou; Seferina Mavroudi; Liviu Vladutu; Anastasios Bezerianos (Appl. Intell., 2002)

The Supervised Network Self-Organizing Map for Classification of Large Data Sets. - Stergios Papadimitriou; Seferina Mavroudi; Liviu Vladutu; Georgios Pavlides; Anastasios Bezerianos (Appl. Intell., 2002)

Gene expression data analysis with a dynamically extended self-organized map that exploits class information. - Seferina Mavroudi; Stergios Papadimitriou; Anastasios Bezerianos (Bioinform., 2002)

Development of advanced computational intelligence models for complex bioinformatics and biosignal processing applications - Seferina Mavroudi (2002)

Integrating Supervised and Unsupervised Learning in Self Organizing Maps for Gene Expression Data Analysis. - Seferina Mavroudi; Andrei Dragomir; Stergios Papadimitriou; Anastasios Bezerianos (ICANN, 2003)

Mutual Information Clustering for Efficient Mining of Fuzzy Association Rules with Application to Gene Expression Data Analysis. - Stergios Papadimitriou; Seferina Mavroudi; Spiridon D. Likothanassis (Int. J. Artif. Intell. Tools, 2006)

Revealing the Structure of Childhood Abdominal Pain Data and Supporting Diagnostic Decision Making. - Adam V. Adamopoulos; Mirto Ntasi; Seferina Mavroudi; Spiros Likothanassis; Lazaros S. Iliadis; George C. Anastassopoulos (EANN, 2009)

Scientific Scripting for the Java Platform with jLab. - Stergios Papadimitriou; Constantinos Terzidis; Seferina Mavroudi; Spiridon D. Likothanassis (Comput. Sci. Eng., 2009)

Adaptive Filtering Techniques Combined with Natural Selection-Based Heuristic Algorithms in the Prediction of Protein-Protein Interactions. - Christos M. Dimitrakopoulos; Konstantinos A. Theofilatos; Efstratios F. Georgopoulos; Spiridon D. Likothanassis; Athanasios K. Tsakalidis; Seferina Mavroudi (EANN, 2011)

ScalaLab: An Effective Scala-Based Scientific Programming Environment for Java. - Stergios Papadimitriou; Constantinos Terzidis; Seferina Mavroudi; Spiridon D. Likothanassis (Comput. Sci. Eng., 2011)

Exploiting java scientific libraries with the scala language within the scalalab environment. - Stergios Papadimitriou; Constantinos Terzidis; Seferina Mavroudi; Spiridon D. Likothanassis (IET Softw., 2011)

Efficient Computational Prediction and Scoring of Human Protein-Protein Interactions Using a Novel Gene Expression Programming Methodology. - Konstantinos A. Theofilatos; Christos M. Dimitrakopoulos; Maria A. Antoniou; Efstratios F. Georgopoulos; Stergios Papadimitriou; Spiros Likothanassis; Seferina Mavroudi (EANN, 2012)

ncRNA-Class Web Tool: Non-coding RNA Feature Extraction and Pre-miRNA Classification Web Tool. - Dimitris Kleftogiannis; Konstantinos A. Theofilatos; Stergios Papadimitriou; Athanasios K. Tsakalidis; Spiros Likothanassis; Seferina Mavroudi (AIAI (2), 2012)

HINT-KB: The Human Interactome Knowledge Base. - Konstantinos A. Theofilatos; Christos M. Dimitrakopoulos; Dimitris Kleftogiannis; Charalampos N. Moschopoulos; Stergios Papadimitriou; Spiros Likothanassis; Seferina Mavroudi (AIAI (2), 2012)

Predicting Human miRNA Target Genes Using a Novel Evolutionary Methodology. - Aigli Korfiati; Dimitris Kleftogiannis; Konstantinos A. Theofilatos; Spiros Likothanassis; Athanasios K. Tsakalidis; Seferina Mavroudi (SETN, 2012)

The software architecture for performing scientific computation with the JLAPACK libraries in ScalaLab. - Stergios Papadimitriou; Seferina Mavroudi; Konstantinos A. Theofilatos; Spiridon Likothanasis (Sci. Program., 2012)

Enhanced Weighted Restricted Neighborhood Search Clustering: A Novel Algorithm for Detecting Human Protein Complexes from Weighted Protein-Protein Interaction Graphs. - Christos M. Dimitrakopoulos; Konstantinos A. Theofilatos; Andreas Pegkas; Spiros Likothanassis; Seferina Mavroudi (EANN (2), 2013)

AppendicitisScan Tool: A New Tool for the Efficient Classification of Childhood Abdominal Pain Clinical Cases Using Machine Learning Tools. - Athanasios Mitroulias; Konstantinos A. Theofilatos; Spiros Likothanassis; Seferina Mavroudi (EANN (2), 2013)

Where we stand, where we are moving: Surveying computational techniques for identifying miRNA genes and uncovering their regulatory role. - Dimitris Kleftogiannis; Aigli Korfiati; Konstantinos A. Theofilatos; Spiros Likothanassis; Athanasios K. Tsakalidis; Seferina Mavroudi (J. Biomed. Informatics, 2013)

A New Framework for Bridging the Gap from Protein-Protein Interactions to Biological Process Interactions. - Christos M. Dimitrakopoulos; Andreas Dimitris Vlantis; Konstantinos A. Theofilatos; Spiros Likothanassis; Seferina Mavroudi (AIAI (Workshops), 2014)

The Human Interactome Knowledge Base (HINT-KB): an integrative human protein interaction database enriched with predicted protein-protein interaction scores using a novel hybrid technique. - Konstantinos A. Theofilatos; Christos M. Dimitrakopoulos; Spiros Likothanassis; Dimitris Kleftogiannis; Charalampos N. Moschopoulos; Christos Alexakos; Stergios Papadimitriou; Seferina Mavroudi (Artif. Intell. Rev., 2014)

EnsembleGASVR: a novel ensemble method for classifying missense single nucleotide polymorphisms. - Trisevgeni Rapakoulia; Konstantinos A. Theofilatos; Dimitris Kleftogiannis; Spiridon Likothanasis; Athanasios K. Tsakalidis; Seferina Mavroudi (Bioinform., 2014)

MATLAB-like scripting of Java scientific libraries in ScalaLab. - Stergios Papadimitriou; Seferina Mavroudi; Kostas A. Theofilatos; Spiridon Likothanasis (Sci. Program., 2014)

Predicting and classifying short non-coding RNAs using a multiclass evolutionary methodology. - Vasiliki Retsi; Ianthi Aggeliki Leonti; Aigli Korfiati; Konstantinos A. Theofilatos; Spiros Likothanassis; Seferina Mavroudi (EANN Workshops, 2015)

Predicting protein complexes from weighted protein-protein interaction graphs with a novel unsupervised methodology: Evolutionary enhanced Markov clustering. - Konstantinos A. Theofilatos; Niki Pavlopoulou; Christoforos Papasavvas; Spiros Likothanassis; Christos M. Dimitrakopoulos; Efstratios F. Georgopoulos; Charalampos N. Moschopoulos; Seferina Mavroudi (Artif. Intell. Medicine, 2015)

ncRNAclass: A Web Platform for Non-Coding RNA Feature Calculation and MicroRNAs and Targets Prediction. - Konstantina Karathanou; Konstantinos A. Theofilatos; Dimitris Kleftogiannis; Christos Alexakos; Spiros Likothanassis; Athanasios K. Tsakalidis; Seferina Mavroudi (Int. J. Artif. Intell. Tools, 2015)

Predicting human miRNA target genes using a novel computational intelligent framework. - Aigli Korfiati; Konstantinos A. Theofilatos; Dimitris Kleftogiannis; Christos Alexakos; Spiros Likothanassis; Seferina Mavroudi (Inf. Sci., 2015)

ScalaLab and GroovyLab: Comparing Scala and Groovy for Scientific Computing. - Stergios Papadimitriou; Kirsten Schwark; Seferina Mavroudi; Kostas A. Theofilatos; Spiridon Likothanasis (Sci. Program., 2015)

YamiPred: A Novel Evolutionary Method for Predicting Pre-miRNAs and Selecting Relevant Features. - Dimitrios Kleftogiannis; Konstantinos A. Theofilatos; Spiros Likothanassis; Seferina Mavroudi (IEEE ACM Trans. Comput. Biol. Bioinform., 2015)

On the Computational Prediction of miRNA Promoters. - Charalampos Michail; Aigli Korfiati; Konstantinos A. Theofilatos; Spiros Likothanassis; Seferina Mavroudi (AIAI, 2016)

Superclusteroid 2.0: A Web Tool for Processing Big Biological Networks. - Maria Tserirzoglou-Thoma; Konstantinos A. Theofilatos; Eleni Tsitsouli; Georgios Panges-Tserres; Christos Alexakos; Charalampos N. Moschopoulos; Georgios Alexopoulos; Konstantinos Giannoulis; Spiros Likothanassis; Seferina Mavroudi (AIAI, 2016)

Predicting overlapping protein complexes from weighted protein interaction graphs by gradually expanding dense neighborhoods. - Christos M. Dimitrakopoulos; Konstantinos A. Theofilatos; Andreas Pegkas; Spiros Likothanassis; Seferina Mavroudi (Artif. Intell. Medicine, 2016)

Non-coding RNA Sequences Identification and Classification Using a Multi-class and Multi-label Ensemble Technique. - Michalis Stavridis; Aigli Korfiati; Georgios Sakellaropoulos; Seferina Mavroudi; Konstantinos A. Theofilatos (AIAI (Workshops), 2018)

A precision medicine approach for non-opioid pain therapy using a combination of multi-objective optimization and support vector regression. - Jeffrey Gudin; Seferina Mavroudi; Aigli Korfiati; Konstantinos A. Theofilatos; Derek Dietze; Peter Hurwitz (IISA, 2019)