Using Deep Learning with Position Specific Scoring Matrices to Identify Efflux Proteins in Membrane and Transport Proteins. - Semmy Wellem Taju; Nguyen-Quoc-Khanh Le; Yu-Yen Ou (BIBE, 2016)

DeepEfflux: a 2D convolutional neural network model for identifying families of efflux proteins in transporters. - Semmy Wellem Taju; Trinh-Trung-Duong Nguyen; Nguyen-Quoc-Khanh Le; Rosdyana Mangir Irawan Kusuma; Yu-Yen Ou (Bioinform., 2018)

DeepIon: Deep learning approach for classifying ion transporters and ion channels from membrane proteins. - Semmy Wellem Taju; Yu-Yen Ou (J. Comput. Chem., 2019)

DeepSIRT: A deep neural network for identification of sirtuin targets and their subcellular localizations. - Syed Muazzam Ali Shah; Semmy Wellem Taju; Bongani Brian Dlamini; Yu-Yen Ou (Comput. Biol. Chem., 2021)

ActTRANS: Functional classification in active transport proteins based on transfer learning and contextual representations. - Semmy Wellem Taju; Syed Muazzam Ali Shah; Yu-Yen Ou (Comput. Biol. Chem., 2021)

GT-Finder: Classify the family of glucose transporters with pre-trained BERT language models. - Syed Muazzam Ali Shah; Semmy Wellem Taju; Quang-Thai Ho; Trinh-Trung-Duong Nguyen; Yu-Yen Ou (Comput. Biol. Medicine, 2021)

A Novel Temporal Dynamic Wavelength Bandwidth Allocation Based on Long-Short-Term-Memory in NG-EPON. - Andrew Tanny Liem; I-Shyan Hwang; Elaiyasuriyan Ganesan; Semmy Wellem Taju; Green Arther Sandag (IEEE Access, 2023)