BioUML: an integrated environment for systems biology and collaborative analysis of biomedical data. - Fedor A. Kolpakov; Ilya R. Akberdin; Timur A. Kashapov; llya Kiselev; Semyon Kolmykov; Yury V. Kondrakhin; Elena Kutumova; Nikita Mandrik; Sergey S. Pintus; Anna Ryabova; Ruslan N. Sharipov; Ivan S. Yevshin; et al. (Nucleic Acids Res., 2019)

GTRD: a database on gene transcription regulation - 2019 update. - Ivan S. Yevshin; Ruslan N. Sharipov; Semyon Kolmykov; Yury V. Kondrakhin; Fedor A. Kolpakov (Nucleic Acids Res., 2019)

GTRD: an integrated view of transcription regulation. - Semyon Kolmykov; Ivan S. Yevshin; Mikhail Kulyashov; Ruslan N. Sharipov; Yury V. Kondrakhin; Vsevolod J. Makeev; Ivan V. Kulakovskiy; Alexander E. Kel; Fedor A. Kolpakov (Nucleic Acids Res., 2021)

ANANASTRA: annotation and enrichment analysis of allele-specific transcription factor binding at SNPs. - Alexandr Boytsov; Sergey Abramov; Ariuna Z. Aiusheeva; Alexandra M. Kasianova; Eugene Baulin; Ivan A. Kuznetsov; Yurii S. Aulchenko; Semyon Kolmykov; Ivan S. Yevshin; Fedor A. Kolpakov; Ilya E. Vorontsov; Vsevolod J. Makeev; et al. (Nucleic Acids Res., 2022)

BioUML - towards a universal research platform. - Fedor A. Kolpakov; Ilya R. Akberdin; Ilya Kiselev; Semyon Kolmykov; Yury V. Kondrakhin; Mikhail Kulyashov; Elena Kutumova; Sergey S. Pintus; Anna Ryabova; Ruslan N. Sharipov; Ivan S. Yevshin; Sergey Zhatchenko; et al. (Nucleic Acids Res., 2022)