An Evaluation of Deformation-Based Morphometry Applied to the Developing Human Brain and Detection of Volumetric Changes Associated with Preterm Birth. - James P. Boardman; Kanwal K. Bhatia; Serena J. Counsell; Joanna M. Allsop; Olga Kapellou; Mary A. Rutherford; A. David Edwards; Joseph V. Hajnal; Daniel Rueckert (MICCAI (1), 2003)

A whole brain morphometric analysis of changes associated with pre-term birth. - Carlos E. Thomaz; James P. Boardman; Serena J. Counsell; Derek L. G. Hill; Joseph V. Hajnal; A. David Edwards; Mary A. Rutherford; Duncan Fyfe Gillies; Daniel Rueckert (Image Processing, 2006)

Abnormal deep grey matter development following preterm birth detected using deformation-based morphometry. - James P. Boardman; Serena J. Counsell; Daniel Rueckert; Olga Kapellou; Kanwal K. Bhatia; Paul Aljabar; Joseph V. Hajnal; Joanna M. Allsop; Mary A. Rutherford; A. David Edwards (NeuroImage, 2006)

The effect of preterm birth on neonatal cerebral vasculature studied with magnetic resonance angiography at 3 Tesla. - Christina Malamateniou; Serena J. Counsell; Joanna M. Allsop; Julie Fitzpatrick; Latha Srinivasan; Frances M. Cowan; Joseph V. Hajnal; Mary A. Rutherford (NeuroImage, 2006)

Groupwise Combined Segmentation and Registration for Atlas Construction. - Kanwal K. Bhatia; Paul Aljabar; James P. Boardman; Latha Srinivasan; Maria Murgasova; Serena J. Counsell; Mary A. Rutherford; Joseph V. Hajnal; A. David Edwards; Daniel Rueckert (MICCAI (1), 2007)

In-utero Three Dimension High Resolution Fetal Brain Diffusion Tensor Imaging. - Shuzhou Jiang; Hui Xue 006; Serena J. Counsell; Mustafa Anjari; Joanna M. Allsop; Mary A. Rutherford; Daniel Rueckert; Joseph V. Hajnal (MICCAI (1), 2007)

A multivariate statistical analysis of the developing human brain in preterm infants. - Carlos E. Thomaz; James P. Boardman; Serena J. Counsell; Derek L. G. Hill; Joseph V. Hajnal; A. David Edwards; Mary A. Rutherford; Duncan Fyfe Gillies; Daniel Rueckert (Image Vis. Comput., 2007)

Diffusion tensor imaging with tract-based spatial statistics reveals local white matter abnormalities in preterm infants. - Mustafa Anjari; Latha Srinivasan; Joanna M. Allsop; Joseph V. Hajnal; Mary A. Rutherford; A. David Edwards; Serena J. Counsell (NeuroImage, 2007)

Thalamo-cortical connectivity in children born preterm mapped using probabilistic magnetic resonance tractography. - Serena J. Counsell; Leigh Dyet; David J. Larkman; Rita Gouveia Nunes; James P. Boardman; Joanna M. Allsop; Julie Fitzpatrick; Latha Srinivasan; Frances M. Cowan; Joseph V. Hajnal; Mary A. Rutherford; A. David Edwards (NeuroImage, 2007)

Combining Morphological Information in a Manifold Learning Framework: Application to Neonatal MRI. - Paul Aljabar; Robin Wolz; Latha Srinivasan; Serena J. Counsell; James P. Boardman; Maria Murgasova; Valentina Doria; Mary A. Rutherford; A. David Edwards; Joseph V. Hajnal (MICCAI (3), 2010)

Somatosensory cortical activation identified by functional MRI in preterm and term infants. - Tomoki Arichi; A. Moraux; A. Melendez; Valentina Doria; M. Groppo; Nazakat Merchant; S. Combs; Etienne Burdet; David J. Larkman; Serena J. Counsell; Christian F. Beckmann; A. David Edwards (NeuroImage, 2010)

An optimised tract-based spatial statistics protocol for neonates: Applications to prematurity and chronic lung disease. - Gareth Ball; Serena J. Counsell; Mustafa Anjari; Nazakat Merchant; Tomoki Arichi; Valentina Doria; Mary A. Rutherford; A. David Edwards; Daniel Rueckert; James P. Boardman (NeuroImage, 2010)

A common neonatal image phenotype predicts adverse neurodevelopmental outcome in children born preterm. - James P. Boardman; C. Craven; S. Valappil; Serena J. Counsell; Leigh Dyet; Daniel Rueckert; Paul Aljabar; Mary A. Rutherford; A. T. M. Chew; Joanna M. Allsop; Frances M. Cowan; A. David Edwards (NeuroImage, 2010)

Tracking developmental changes in subcortical structures of the preterm brain using multi-modal MRI. - Ahmed Serag; Paul Aljabar; Serena J. Counsell; James P. Boardman; Joseph V. Hajnal; Daniel Rueckert (ISBI, 2011)

Construction of a 4D atlas of the developing brain using non-rigid registration. - Ahmed Serag; Paul Aljabar; Serena J. Counsell; James P. Boardman; Joseph V. Hajnal; Daniel Rueckert (ISBI, 2011)

A Four-dimensional Atlas of Neonatal Brain MRI. - Ahmed Serag; Paul Aljabar; Serena J. Counsell; James P. Boardman; Joseph V. Hajnal; Daniel Rueckert (MIUA, 2011)

A dynamic 4D probabilistic atlas of the developing brain. - Maria Kuklisova-Murgasova; Paul Aljabar; Latha Srinivasan; Serena J. Counsell; Valentina Doria; Ahmed Serag; Ioannis S. Gousias; James P. Boardman; Mary A. Rutherford; A. David Edwards; Joseph V. Hajnal; Daniel Rueckert (NeuroImage, 2011)

A Combined Manifold Learning Analysis of Shape and Appearance to Characterize Neonatal Brain Development. - Paul Aljabar; Robin Wolz; Latha Srinivasan; Serena J. Counsell; Mary A. Rutherford; A. David Edwards; Joseph V. Hajnal; Daniel Rueckert (IEEE Trans. Medical Imaging, 2011)

LISA: Longitudinal image registration via spatio-temporal atlases. - Ahmed Serag; Paul Aljabar; Serena J. Counsell; James P. Boardman; Joseph V. Hajnal; Daniel Rueckert (ISBI, 2012)

Unsupervised Learning of Shape Complexity: Application to Brain Development. - Ahmed Serag; Ioannis S. Gousias; Antonios Makropoulos; Paul Aljabar; Joseph V. Hajnal; James P. Boardman; Serena J. Counsell; Daniel Rueckert (STIA, 2012)

Development of BOLD signal hemodynamic responses in the human brain. - Tomoki Arichi; Gianlorenzo Fagiolo; Marta Varela; Alejandro Melendez-Calderon; Alessandro Allievi; Nazakat Merchant; Nora Tusor; Serena J. Counsell; Etienne Burdet; Christian F. Beckmann; A. David Edwards (NeuroImage, 2012)

Magnetic resonance imaging of the newborn brain: Manual segmentation of labelled atlases in term-born and preterm infants. - Ioannis S. Gousias; A. David Edwards; Mary A. Rutherford; Serena J. Counsell; Joseph V. Hajnal; Daniel Rueckert; Alexander Hammers (NeuroImage, 2012)

Regional changes in thalamic shape and volume with increasing age. - Emer J. Hughes; Jacqueline Bond; Patricia Svrckova; Antonios Makropoulos; Gareth Ball; David J. Sharp; A. David Edwards; Joseph V. Hajnal; Serena J. Counsell (NeuroImage, 2012)

Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression. - Ahmed Serag; Paul Aljabar; Gareth Ball; Serena J. Counsell; James P. Boardman; Mary A. Rutherford; A. David Edwards; Joseph V. Hajnal; Daniel Rueckert (NeuroImage, 2012)

Erratum to Construction of a consistent high-definition spatio-temporal atlas of the developing brain using adaptive kernel regression [NeuroImage 59/3(2012) 2255-2265]. - Ahmed Serag; Paul Aljabar; Gareth Ball; Serena J. Counsell; James P. Boardman; Mary A. Rutherford; A. David Edwards; Joseph V. Hajnal; Daniel Rueckert (NeuroImage, 2012)

Normalisation of Neonatal Brain Network Measures Using Stochastic Approaches. - Markus Schirmer; Gareth Ball; Serena J. Counsell; A. David Edwards; Daniel Rueckert; Joseph V. Hajnal; Paul Aljabar (MICCAI (1), 2013)

Construction of a 4D Brain Atlas and Growth Model Using Diffeomorphic Registration. - Andreas Schuh; Maria Murgasova; Antonios Makropoulos; Christian Ledig; Serena J. Counsell; Joseph V. Hajnal; Paul Aljabar; Daniel Rueckert (STIA, 2014)

Automatic Whole Brain MRI Segmentation of the Developing Neonatal Brain. - Antonios Makropoulos; Ioannis S. Gousias; Christian Ledig; Paul Aljabar; Ahmed Serag; Joseph V. Hajnal; A. David Edwards; Serena J. Counsell; Daniel Rueckert (IEEE Trans. Medical Imaging, 2014)

Learning and Combining Image Similarities for Neonatal Brain Population Studies. - Veronika A. M. Zimmer; Ben Glocker; Paul Aljabar; Serena J. Counsell; Mary A. Rutherford; A. David Edwards; Joseph V. Hajnal; Miguel Ángel González Ballester; Daniel Rueckert; Gemma Piella (MLMI, 2015)

Evaluation of automatic neonatal brain segmentation algorithms: The NeoBrainS12 challenge. - Ivana Isgum; Manon J. N. L. Benders; Brian B. Avants; Manuel Jorge Cardoso; Serena J. Counsell; Elda Fischi Gomez; Laura Gui; Petra S. Hüppi; Karina J. Kersbergen; Antonios Makropoulos; Andrew Melbourne; Pim Moeskops; et al. (Medical Image Anal., 2015)

Machine-learning to characterise neonatal functional connectivity in the preterm brain. - Gareth Ball; Paul Aljabar; Tomoki Arichi; Nora Tusor; D. Cox; Nazakat Merchant; P. Nongena; Joseph V. Hajnal; A. David Edwards; Serena J. Counsell (NeuroImage, 2016)

Regional growth and atlasing of the developing human brain. - Antonios Makropoulos; Paul Aljabar; Robert Wright; Britta Hüning; Nazakat Merchant; Tomoki Arichi; Nora Tusor; Joseph V. Hajnal; A. David Edwards; Serena J. Counsell; Daniel Rueckert (NeuroImage, 2016)

Early development of structural networks and the impact of prematurity on brain connectivity. - Dafnis Batalle; Emer J. Hughes; Hui Zhang 005; Jacques-Donald Tournier; Nora Tusor; Paul Aljabar; Luqman Wali; Daniel C. Alexander; Joseph V. Hajnal; Chiara Nosarti; A. David Edwards; Serena J. Counsell (NeuroImage, 2017)

The emergence of functional architecture during early brain development. - Kristin Keunen; Serena J. Counsell; Manon J. N. L. Benders (NeuroImage, 2017)

A tract-specific approach to assessing white matter in preterm infants. - Diliana Pecheva; Paul A. Yushkevich; Dafnis Batalle; Emer J. Hughes; Paul Aljabar; Julia Wurie; Joseph V. Hajnal; A. David Edwards; Daniel C. Alexander; Serena J. Counsell; Hui Zhang 005 (NeuroImage, 2017)

A review on automatic fetal and neonatal brain MRI segmentation. - Antonios Makropoulos; Serena J. Counsell; Daniel Rueckert (NeuroImage, 2018)

The developing human connectome project: A minimal processing pipeline for neonatal cortical surface reconstruction. - Antonios Makropoulos; Emma C. Robinson; Andreas Schuh; Robert Wright; Sean P. Fitzgibbon; Jelena Bozek; Serena J. Counsell; Johannes K. Steinweg; Katy Vecchiato; Jonathan Passerat-Palmbach; Gregor Lenz; Filippo Mortari; et al. (NeuroImage, 2018)

Different patterns of cortical maturation before and after 38 weeks gestational age demonstrated by diffusion MRI in vivo. - Dafnis Batalle; Jonathan O'Muircheartaigh; Antonios Makropoulos; Christopher J. Kelly; Ralica Dimitrova; Emer J. Hughes; Joseph V. Hajnal; Hui Zhang 005; Daniel C. Alexander; A. David Edwards; Serena J. Counsell (NeuroImage, 2019)

A framework for multi-component analysis of diffusion MRI data over the neonatal period. - Maximilian Pietsch; Daan Christiaens; Jana Hutter; Lucilio Cordero-Grande; Anthony N. Price; Emer J. Hughes; A. David Edwards; Joseph V. Hajnal; Serena J. Counsell; Jacques-Donald Tournier (NeuroImage, 2019)

Automatic Detection of Neonatal Brain Injury on MRI. - Russell Macleod; Jonathan O'Muircheartaigh; A. David Edwards; David W. Carmichael; Mary A. Rutherford; Serena J. Counsell (ASMUS/PIPPI@MICCAI, 2020)

Higher Order Spherical Harmonics Reconstruction of Fetal Diffusion MRI With Intensity Correction. - Maria Deprez; Anthony Price; Daan Christiaens; Georgia Lockwood Estrin; Lucilio Cordero-Grande; Jana Hutter; Alessandro Daducci; Jacques-Donald Tournier; Mary A. Rutherford; Serena J. Counsell; Meritxell Bach Cuadra; Joseph V. Hajnal (IEEE Trans. Medical Imaging, 2020)

Detection of Injury and Automated Triage of Preterm Neonatal MRI Using Patch-Based Gaussian Processes. - Russell Macleod; Serena J. Counsell; David W. Carmichael; Ralica Dimitrova; Maximilian Pietsch; A. David Edwards; Mary A. Rutherford; Jonathan O'Muircheartaigh (UNSURE/PIPPI@MICCAI, 2021)

Preterm birth alters the development of cortical microstructure and morphology at term-equivalent age. - Ralica Dimitrova; Maximilian Pietsch; Judit Ciarrusta; Sean P. Fitzgibbon; Logan Z. J. Williams; Daan Christiaens; Lucilio Cordero-Grande; Dafnis Batalle; Antonios Makropoulos; Andreas Schuh; Anthony N. Price; Jana Hutter; et al. (NeuroImage, 2021)

Segmentation of Periventricular White Matter in Neonatal Brain MRI: Analysis of Brain Maturation in Term and Preterm Cohorts. - Alena Uus; Mohammad-Usamah Ayub; Abi Gartner; Vanessa Kyriakopoulou; Maximilian Pietsch; Irina Grigorescu; Daan Christiaens; Jana Hutter; Lucilio Cordero-Grande; Anthony Price; Dafnis Batalle; Serena J. Counsell; et al. (PIPPI@MICCAI, 2022)

Predicting age and clinical risk from the neonatal connectome. - Yassine Taoudi-Benchekroun; Daan Christiaens; Irina Grigorescu; Oliver Gale-Grant; Andreas Schuh; Maximilian Pietsch; Andrew Chew; Nicholas Harper; Shona Falconer; Tanya Poppe; Emer J. Hughes; Jana Hutter; et al. (NeuroImage, 2022)