Using Statistical Properties of Short Subsequences in Microbial Identification. - Sergei Chumakov; Catherine Putonti; B. Montgomery Pettitt; George E. Fox; Richard C. Willson; Yuriy Fofanov (METMBS, 2004)

How independent are the appearances of n-mers in different genomes? - Yuriy Fofanov; Yi Luo; Charles Katili; Jim Wang; Yuri Belosludtsev; Thomas Powdrill; Chetan Belapurkar; Viacheslav Fofanov; Tong-Bin Li; Sergei Chumakov; B. Montgomery Pettitt (Bioinform., 2004)

Effect of the mutation rate and background size on the quality of pathogen identification. - Chris Reed 003; Viacheslav Fofanov; Catherine Putonti; Sergei Chumakov; Tom Slezak; Yuriy Fofanov (Bioinform., 2007)

CoCo: An application to store High-Throughput Sequencing data in compact text and binary file formats. - Kamil Khanipov; Georgiy Golovko; Mark Rojas; Levent Albayrak; Otto Dobretsberger; Maria Pimenova; Nels Olson; Sergei Chumakov; Yuriy Fofanov (BIBM, 2015)