A Compressed Format for Collections of Phylogenetic Trees and Improved Consensus Performance. - Robert S. Boyer; Warren A. Hunt Jr.; Serita M. Nelesen (WABI, 2005)

Phylogenetic trees in ACL2. - Warren A. Hunt Jr.; Serita M. Nelesen (ACL2, 2006)

The Effect of the Guide Tree on Multiple Sequence Alignments and Subsequent Phylogenetic Analysis. - Serita M. Nelesen; Kevin Liu; D. Zhao; C. Randal Linder; Tandy J. Warnow (Pacific Symposium on Biocomputing, 2008)

Barking Up The Wrong Treelength: The Impact of Gap Penalty on Alignment and Tree Accuracy. - Kevin Liu; Serita M. Nelesen; Sindhu Raghavan; C. Randal Linder; Tandy J. Warnow (IEEE ACM Trans. Comput. Biol. Bioinform., 2009)

DACTAL: divide-and-conquer trees (almost) without alignments. - Serita M. Nelesen; Kevin Liu; Li-San Wang; C. Randal Linder; Tandy J. Warnow (Bioinform., 2012)

Seeing Is Believing: Helping Students Visualize Multithreaded Behavior. - Joel C. Adams; Patrick A. Crain; Christopher P. Dilley; Serita M. Nelesen; Javin B. Unger; Mark B. Vander Stel (SIGCSE, 2016)

Using Small Whiteboards to Engage Students in Active Learning (Abstract Only). - Victor T. Norman; Serita M. Nelesen (SIGCSE, 2016)

PhamDB: a web-based application for building Phamerator databases. - James G. Lamine; Randall J. DeJong; Serita M. Nelesen (Bioinform., 2016)

TSGL: A tool for visualizing multithreaded behavior. - Joel C. Adams; Patrick A. Crain; Christopher P. Dilley; Christiaan D. Hazlett; Elizabeth R. Koning; Serita M. Nelesen; Javin B. Unger; Mark B. Vander Stel (J. Parallel Distributed Comput., 2018)