COVID-Datathon: Biomarker identification for COVID-19 severity based on BALF scRNA-seq data. - Seyednami Niyakan; Xiaoning Qian (CoRR, 2021)

Pathway-based analyses of gene expression profiles at low doses of ionizing radiation. - Xihaier Luo; Seyednami Niyakan; Patrick R. Johnstone; Sean McCorkle; Gilchan Park; Vanessa López-Marrero; Shinjae Yoo; Edward R. Dougherty; Xiaoning Qian; Francis J. Alexander; Shantenu Jha; Byung-Jun Yoon (Frontiers Bioinform., 2024)

MUSTANG: Multi-sample spatial transcriptomics data analysis with cross-sample transcriptional similarity guidance. - Seyednami Niyakan; Jianting Sheng; Yuliang Cao; Xiang Zhang; Zhan Xu; Ling Wu; Stephen T. C. Wong; Xiaoning Qian (Patterns, 2024)