A Voronoi-Based Reactive Approach for Mobile Robot Navigation. - Shahin Mohammadi; Nima Hazar (CSICC, 2008)

Kavosh: a new algorithm for finding network motifs. - Zahra Razaghi Moghadam Kashani; Hayedeh Ahrabian; Elahe Elahi; Abbas Nowzari-Dalini; Elnaz Saberi Ansari; Sahar Asadi; Shahin Mohammadi; Falk Schreiber; Ali Masoudi-Nejad (BMC Bioinform., 2009)

Role of Synthetic Genetic Interactions in Understanding Functional Interactions Among Pathways. - Shahin Mohammadi; Giorgios Kollias; Ananth Grama (Pacific Symposium on Biocomputing, 2012)

Network Similarity Decomposition (NSD): A Fast and Scalable Approach to Network Alignment. - Giorgios Kollias; Shahin Mohammadi; Ananth Grama (IEEE Trans. Knowl. Data Eng., 2012)

Inferring the effective TOR-dependent network: a computational study in yeast. - Shahin Mohammadi; Shankar Subramaniam; Ananth Grama (BMC Syst. Biol., 2013)

Scope and limitations of yeast as a model organism for studying human tissue-specific pathways. - Shahin Mohammadi; Baharak Saberidokht; Shankar Subramaniam; Ananth Grama (BMC Syst. Biol., 2015)

De novo identification of cell type hierarchy with application to compound marker detection. - Shahin Mohammadi; Ananth Grama (BCB, 2016)

Context-Specific Recommendation System for Predicting Similar PubMed Articles. - Shahin Mohammadi; Sudhir B. Kylasa; Giorgios Kollias; Ananth Grama (ICDM Workshops, 2016)

A convex optimization approach for identification of human tissue-specific interactomes. - Shahin Mohammadi; Ananth Grama (Bioinform., 2016)

Combining Density and Overlap (CoDO): A New Method for Assessing the Significance of Overlap Among Subgraphs. - Abram Magner; Shahin Mohammadi; Ananth Grama (CoRR, 2016)

Cell Type-specific Analysis of Human Interactome and Transcriptome - Shahin Mohammadi (2016)

A Critical Survey of Deconvolution Methods for Separating Cell Types in Complex Tissues. - Shahin Mohammadi; Neta S. Zuckerman; Andrea Goldsmith; Ananth Grama (Proc. IEEE, 2017)

Triangular Alignment (TAME): A Tensor-Based Approach for Higher-Order Network Alignment. - Shahin Mohammadi; David F. Gleich; Tamara G. Kolda; Ananth Grama (IEEE ACM Trans. Comput. Biol. Bioinform., 2017)

Low Rank Spectral Network Alignment. - Huda Nassar; Nate Veldt; Shahin Mohammadi; Ananth Grama; David F. Gleich (WWW, 2018)

A parallel algorithm for generation of RNA secondary structures with length n and k base-pairs. - Shahin Mohammadi; Abbas Nowzari-Dalini (Iran J. Comput. Sci., 2018)

Country-scale spatio-temporal monitoring of soil erosion in Iran using the G2 model. - Shahin Mohammadi; Fatemeh Balouei; Khadijeh Haji; Abdulvahed Khaledi Darvishan; Christos G. Karydas (Int. J. Digit. Earth, 2021)

Environmental Conditions in Middle Eastern Megacities: A Comparative Spatiotemporal Analysis Using Remote Sensing Time Series. - Shahin Mohammadi; Mohsen Saber; Saeid Amini; Mir Abolfazl Mostafavi; Gavin McArdle; Hamidreza Rabiei-Dastjerdi (Remote. Sens., 2022)

Spatiotemporal Analysis of NO2 Production Using TROPOMI Time-Series Images and Google Earth Engine in a Middle Eastern Country. - Hamidreza Rabiei-Dastjerdi; Shahin Mohammadi; Mohsen Saber; Saeid Amini; Gavin McArdle (Remote. Sens., 2022)

Challenges of rainfall erosivity prediction: A Novel GIS-Based Optimization algorithm to reduce uncertainty in large country modeling. - Mostafa Kabolizade; Kazem Rangzan; Shahin Mohammadi; Hamidreza Rabiei-Dastjerdi (Earth Sci. Informatics, 2024)