New computational model for miRNA-mediated repression reveals novel regulatory roles of miRNA bindings inside the coding region. - Shaked Bergman; Alon Diament; Tamir Tuller (Bioinform., 2021)

Strong association between genomic 3D structure and CRISPR cleavage efficiency. - Shaked Bergman; Tamir Tuller (PLoS Comput. Biol., 2024)