Efficient sampling algorithm for estimating subgraph concentrations and detecting network motifs. - Nadav Kashtan; Shalev Itzkovitz; Ron Milo; Uri Alon 001 (Bioinform., 2004)

Recurring Harmonic Walks and Network motifs in Western Music. - Shalev Itzkovitz; Ron Milo; Nadav Kashtan; Reuven Levitt; Amir Lahav; Uri Alon 001 (Adv. Complex Syst., 2006)

A Universal Mechanism Ties Genotype to Phenotype in Trinucleotide Diseases. - Shai Kaplan; Shalev Itzkovitz; Ehud Shapiro (PLoS Comput. Biol., 2007)

Using Expression Profiles of Caenorhabditis elegans Neurons To Identify Genes That Mediate Synaptic Connectivity. - Leehod Baruch; Shalev Itzkovitz; Michal Golan-Mashiach; Ehud Shapiro; Eran Segal (PLoS Comput. Biol., 2008)

Estimating Cell Depth from Somatic Mutations. - Adam Wasserstrom; Dan Frumkin; Rivka Adar; Shalev Itzkovitz; Tomer Stern; Shai Kaplan; Gabi Shefer; Irena Shur; Lior Zangi; Yitzhak Reizel; Alon Harmelin; Yuval Dor; et al. (PLoS Comput. Biol., 2008)

Invariant Distribution of Promoter Activities in Escherichia coli. - Alon Zaslaver; Shai Kaplan; Anat Bren; Adrian Jinich; Avi E. Mayo; Erez Dekel; Uri Alon 001; Shalev Itzkovitz (PLoS Comput. Biol., 2009)

Single-cell mapping of the thymic stroma identifies IL-25-producing tuft epithelial cells. - Chamutal Bornstein; Shir Nevo; Amir Giladi; Noam Kadouri; Marie Pouzolles; François Gerbe; Eyal David; Alice Machado; Anna Chuprin; Beáta Tóth; Ori Goldberg; Shalev Itzkovitz; et al. (Nat., 2018)

cellanneal: A user-friendly deconvolution software for transcriptomics data. - Lisa Buchauer; Shalev Itzkovitz (J. Open Source Softw., 2024)