The Infectious Disease Ontology in the age of COVID-19. - Shane Babcock; John Beverley; Lindsay G. Cowell; Barry Smith 001 (J. Biomed. Semant., 2021)

Coordinating Coronavirus Research: The Virus Infectious Disease Ontology. - John Beverley; Yongqun He; Barry Smith 001; Shane Babcock; Eric Merrell; Lindsay G. Cowell; Regina Hurley; Sebastian Deusing (ICBO, 2022)

Grounding Realizable Entities. - Michael Rabenberg; Carter Benson; Federico Donato; Yongqun He; Anthony Huffman; Shane Babcock; John Beverley (ICBO, 2024)

The Human Capital Ontology (Extended Abstract). - Shane Babcock; Maxwell Farrington; John Gugliotti (CoRR, 2025)

A fourfold pathogen reference ontology suite. - John Beverley; Shane Babcock; Carter Benson; Giacomo De Colle; Sydney Cohen; Alexander D. Diehl; Ram A. N. R. Challa; Ray Mavrovich; Joshua Billig; Anthony Huffman; Yongqun He (J. Biomed. Semant., 2025)