SOAPdenovo-Trans: de novo transcriptome assembly with short RNA-Seq reads. - Yinlong Xie; Gengxiong Wu; Jingbo Tang; Ruibang Luo; Jordan Patterson; Shanlin Liu; Weihua Huang; Guangzhu He; Shengchang Gu; Shengkang Li; Xin Zhou; Tak Wah Lam; et al. (Bioinform., 2014)

Orthograph: a versatile tool for mapping coding nucleotide sequences to clusters of orthologous genes. - Malte Petersen; Karen Meusemann; Alexander Donath; Daniel Dowling; Shanlin Liu; Ralph S. Peters; Lars Podsiadlowski; Alexandros Vasilikopoulos; Xin Zhou; Bernhard Misof; Oliver Niehuis (BMC Bioinform., 2017)

NextPolish: a fast and efficient genome polishing tool for long-read assembly. - Jiang Hu; Junpeng Fan; Zongyi Sun; Shanlin Liu (Bioinform., 2020)

A New Method for Measuring the Rotational Angles of a Precision Spherical Joint Using Eddy Current Sensors. - Penghao Hu; Linchao Zhao; Chuxin Tang; Shanlin Liu; Xueming Dang; Yi Hu (Sensors, 2020)

Adaptive fixed-time hierarchical sliding mode control for switched under-actuated systems with dead-zone constraints via event-triggered strategy. - Shanlin Liu; Ben Niu 003; Guangdeng Zong; Xudong Zhao 001; Ning Xu 013 (Appl. Math. Comput., 2022)

Adaptive neural finite-time hierarchical sliding mode control of uncertain under-actuated switched nonlinear systems with backlash-like hysteresis. - Shanlin Liu; Liang Zhang 039; Ben Niu 003; Xudong Zhao 001; Adil M. Ahmad (Inf. Sci., 2022)

Nuclei Segmentation Method based on CycleGAN-generated Images. - Jie Shu; Qing Wang; Shanlin Liu (SSIP, 2023)

NextPolish2: A Repeat-aware Polishing Tool for Genomes Assembled Using HiFi Long Reads. - Jiang Hu; Zhuo Wang; Fan Liang; Shanlin Liu; Kai Ye 001; De-Peng Wang (Genom. Proteom. Bioinform., 2024)

Adaptive Neural Dynamic-Memory Event-Triggered Control of High-Order Random Nonlinear Systems With Deferred Output Constraints. - Shanlin Liu; Ben Niu 003; Guangdeng Zong; Xudong Zhao 001; Ning Xu 013 (IEEE Trans Autom. Sci. Eng., 2024)

Global Invasion History and Genomic Signatures of Adaptation of the Highly Invasive Sycamore Lace Bug. - Zhenyong Du; Xuan Wang; Yuange Duan; Shanlin Liu; Li Tian; Fan Song; Wanzhi Cai; Hu Li (Genom. Proteom. Bioinform., 2025)

Adaptive Event-Triggered Control for PDE-ODE Cascade Systems via Hierarchical Sliding Mode. - Shanlin Liu; Yingwei Zhang 001; Xudong Zhao 001 (IEEE Trans. Circuits Syst. I Regul. Pap., 2025)

Disturbance-observer-based adaptive neural event-triggered fault-tolerant control for uncertain nonlinear systems against sensor faults. - Zhenhuan Wang; Shanlin Liu; Ben Niu 003; Liang Zhang 039; Ning Zhao 002 (Int. J. Gen. Syst., 2025)