Signal processing techniques in genomic engineering. - Xin-Yun Zhang; Fei Chen 011; Yuan-Ting Zhang; Shannon C. Agner; Metin Akay; Zu-Hong Lu; Mary Miu Yee Waye; Stephen Kwok-Wing Tsui (Proc. IEEE, 2002)

Automated grading of breast cancer histopathology using spectral clusteringwith textural and architectural image features. - Scott Doyle; Shannon Agner; Anant Madabhushi; Michael D. Feldman; John Tomaszewski 001 (ISBI, 2008)

Automated gland and nuclei segmentation for grading of prostate and breast cancer histopathology. - Shivang Naik; Scott Doyle; Shannon Agner; Anant Madabhushi; Michael D. Feldman; John Tomaszewski 001 (ISBI, 2008)

Novel kinetic texture features for breast lesion classification on dynamic contrast enhanced (DCE) MRI. - Shannon C. Agner; Salil Soman; Edward Libfeld; Margie McDonald; Mark A. Rosen; Mitchell D. Schnall; Deanna Chin; John L. Nosher; Anant Madabhushi (Computer-Aided Diagnosis, 2008)

Segmentation and Classification of Triple Negative Breast Cancers Using DCE-MRI. - Shannon Agner; Jun Xu 005; Hussain Fatakdawala; Shridar Ganesan; Anant Madabhushi; Sarah Englander; Mark Rosen; Kathleen Thomas; Mitchell D. Schnall; Michael D. Feldman; John Tomaszewski 001 (ISBI, 2009)

Computer-aided prognosis: predicting patient and disease outcome via multi-modal image analysis. - Anant Madabhushi; Ajay Basavanhally; Scott Doyle; Shannon Agner; George Lee 002 (ISBI, 2010)

Computerized Image-Based Detection and Grading of Lymphocytic Infiltration in HER2+ Breast Cancer Histopathology. - Ajay Basavanhally; Shridar Ganesan; Shannon Agner; James Monaco; Michael D. Feldman; John Tomaszewski 001; Gyan Bhanot; Anant Madabhushi (IEEE Trans. Biomed. Eng., 2010)

Spectral embedding based active contour (SEAC): application to breast lesion segmentation on DCE-MRI. - Shannon Agner; Jun Xu 005; Mark Rosen; Sudha Karthigeyan; Sarah Englander; Anant Madabhushi (Computer-Aided Diagnosis, 2011)

Computer-aided prognosis: Predicting patient and disease outcome via quantitative fusion of multi-scale, multi-modal data. - Anant Madabhushi; Shannon Agner; Ajay Basavanhally; Scott Doyle; George Lee 002 (Comput. Medical Imaging Graph., 2011)

Textural Kinetics: A Novel Dynamic Contrast-Enhanced (DCE)-MRI Feature for Breast Lesion Classification. - Shannon Agner; Salil Soman; Edward Libfeld; Margie McDonald; Kathleen Thomas; Sarah Englander; Mark A. Rosen; Deanna Chin; John L. Nosher; Anant Madabhushi (J. Digit. Imaging, 2011)

Spectral embedding-based registration (SERg) for multimodal fusion of prostate histology and MRI. - Eileen Hwuang; Mirabela Rusu; Sudha Karthigeyan; Shannon Agner; Rachel Sparks; Natalie Shih; John Tomaszewski 001; Mark Rosen; Michael D. Feldman; Anant Madabhushi (Image Processing, 2014)