FigSum: Automatically Generating Structured Text Summaries for Figures in Biomedical Literature. - Shashank Agarwal; Hong Yu 001 (AMIA, 2009)

Automatically classifying sentences in full-text biomedical articles into Introduction, Methods, Results and Discussion. - Shashank Agarwal; Hong Yu 001 (Bioinform., 2009)

Biomedical negation scope detection with conditional random fields. - Shashank Agarwal; Hong Yu 001 (J. Am. Medical Informatics Assoc., 2010)

Detecting hedge cues and their scope in biomedical text with conditional random fields. - Shashank Agarwal; Hong Yu 001 (J. Biomed. Informatics, 2010)

An IR-Aided Machine Learning Framework for the BioCreative II.5 Challenge. - Yonggang Cao; Zuofeng Li; Feifan Liu; Shashank Agarwal; Qing Zhang; Hong Yu 001 (IEEE ACM Trans. Comput. Biol. Bioinform., 2010)

Gateway load balancing in integrated internet-manet using modified AODV routing protocol. - Zahir Aalam; Shashank Agarwal; Shikha Khandelwal (ICWET, 2011)

Figure summarizer browser extensions for PubMed Central. - Shashank Agarwal; Hong Yu 001 (Bioinform., 2011)

Simple and efficient machine learning frameworks for identifying protein-protein interaction relevant articles and experimental methods used to study the interactions. - Shashank Agarwal; Feifan Liu; Hong Yu 001 (BMC Bioinform., 2011)

BioNOT: A searchable database of biomedical negated sentences. - Shashank Agarwal; Hong Yu 001; Isaac S. Kohane (BMC Bioinform., 2011)

BioCreative III interactive task: an overview. - Cecilia N. Arighi; Phoebe M. Roberts; Shashank Agarwal; Sanmitra Bhattacharya; Gianni Cesareni; Andrew Chatr-aryamontri; Simon Clematide; Pascale Gaudet; Michelle G. Giglio; Ian Harrow; Eva Huala; Martin Krallinger; et al. (BMC Bioinform., 2011)

The Protein-Protein Interaction tasks of BioCreative III: classification/ranking of articles and linking bio-ontology concepts to full text. - Martin Krallinger; Miguel Vazquez; Florian Leitner; David Salgado; Andrew Chatr-aryamontri; Andrew G. Winter; Livia Perfetto; Leonardo Briganti; Luana Licata; Marta Iannuccelli; Luisa Castagnoli; Gianni Cesareni; et al. (BMC Bioinform., 2011)

The gene normalization task in BioCreative III. - Zhiyong Lu; Hung-Yu Kao; Chih-Hsuan Wei; Minlie Huang; Jingchen Liu; Cheng-Ju Kuo; Chun-Nan Hsu; Richard Tzong-Han Tsai; Hong-Jie Dai; Naoaki Okazaki; Han-Cheol Cho; Martin Gerner; et al. (BMC Bioinform., 2011)

Automatically Identifying Health- and Clinical-Related Content in Wikipedia. - Feifan Liu; Soheil Moosavinasab; Shashank Agarwal; Andrew S. Bennett; Hong Yu 001 (MedInfo, 2013)

Building a Clinically-Focused Problem List From Medical Notes. - Amir Feder; Itay Laish; Shashank Agarwal; Uri Lerner; Avel Atias; Cathy Cheung; Peter Clardy; Alon Peled-Cohen; Rachana Fellinger; Hengrui Liu; Lan Huong Nguyen; Birju Patel; et al. (LOUHI@EMNLP, 2022)

Reliable Student: Addressing Noise in Semi-Supervised 3D Object Detection. - Farzad Nozarian; Shashank Agarwal; Farzaneh Rezaeianaran; Danish Shahzad; Atanas Poibrenski; Christian Müller 014; Philipp Slusallek (CVPR Workshops, 2023)

LearnLM: Improving Gemini for Learning. - Abhinit Modi; Aditya Srikanth Veerubhotla; Aliya Rysbek; Andrea Huber; Brett Wiltshire; Brian Veprek; Daniel Gillick; Daniel Kasenberg; Derek Ahmed; Irina Jurenka; James Cohan; Jennifer She; et al. (CoRR, 2024)

Evaluating Gemini in an arena for learning. - Abhinit Modi; Aditya Srikanth Veerubhotla; Aliya Rysbek; Andrea Huber; Ankit Anand; Avishkar Bhoopchand; Brett Wiltshire; Daniel Gillick; Daniel Kasenberg; Eleni Sgouritsa; Gal Elidan; Hengrui Liu; et al. (CoRR, 2025)