Phylogenetic Analyses of SARS-CoV-2 Strains Reveal Its Link to the Spread of COVID-19 Across the Globe. - Shashata Sawmya; Arpita Saha; Sadia Tasnim; Naser Anjum Samudro; Md. Toufikuzzaman; Ali Haisam Muhammad Rafid; Mohammad Saifur Rahman 001; M. Sohel Rahman; Tanvir Alam (MedInfo, 2021)

QT-GILD: Quartet Based Gene Tree Imputation Using Deep Learning Improves Phylogenomic Analyses Despite Missing Data. - Sazan Mahbub; Shashata Sawmya; Arpita Saha; Rezwana Reaz; M. Sohel Rahman; Md. Shamsuzzoha Bayzid (RECOMB, 2022)

Quartet Based Gene Tree Imputation Using Deep Learning Improves Phylogenomic Analyses Despite Missing Data. - Sazan Mahbub; Shashata Sawmya; Arpita Saha; Rezwana Reaz; M. Sohel Rahman; Md. Shamsuzzoha Bayzid (J. Comput. Biol., 2022)

PRIEST: predicting viral mutations with immune escape capability of SARS-CoV-2 using temporal evolutionary information. - Gourab Saha; Shashata Sawmya; Arpita Saha; Md Ajwad Akil; Sadia Tasnim; Md Saifur Rahman; M. Sohel Rahman (Briefings Bioinform., 2024)

Sparse Expansion and Neuronal Disentanglement. - Shashata Sawmya; Linghao Kong; Ilia Markov; Dan Alistarh; Nir Shavit (CoRR, 2024)

Wasserstein Distances, Neuronal Entanglement, and Sparsity. - Shashata Sawmya; Linghao Kong; Ilia Markov; Dan Alistarh; Nir Shavit (ICLR, 2025)

A connectomics-driven analysis reveals novel characterization of border regions in mouse visual cortex. - Neehal Tumma; Linghao Kong; Shashata Sawmya; Tony T. Wang 001; Nir Shavit (Neural Networks, 2025)

NeuroADDA: Active Discriminative Domain Adaptation in Connectomic. - Shashata Sawmya; Thomas L. Athey; Gwyneth Liu; Nir Shavit (CoRR, 2025)

Cascade Detector Analysis and Application to Biomedical Microscopy. - Thomas L. Athey; Shashata Sawmya; Nir Shavit (CoRR, 2025)

The Birth of Knowledge: Emergent Features across Time, Space, and Scale in Large Language Models. - Shashata Sawmya; Micah Adler; Nir Shavit (CoRR, 2025)