Inference of transcriptional regulatory network by bootstrapping patterns. - Hei-Chia Wang; Yi-Hsiu Chen; Hung-Yu Kao; Shaw-Jenq Tsai (Bioinform., 2011)

In silico identification of oncogenic potential of fyn-related kinase in hepatocellular carcinoma. - Jia-Shing Chen; Wei-Shiang Hung; Hsiang-Han Chan; Shaw-Jenq Tsai; Hsiao-Fang Sunny Sun (Bioinform., 2013)

Using positive and negative patterns to extract information from journal articles regarding the regulation of a target gene by a transcription factor. - Hei-Chia Wang; Tock-Kheng Kooi; Hung-Yu Kao; Shih Chieh Lin; Shaw-Jenq Tsai (Comput. Biol. Medicine, 2013)

A semi-supervised, weighted pattern-learning approach for extraction of gene regulation relationships from scientific literature. - Yi-Tsung Tang; Hung-Yu Kao; Shaw-Jenq Tsai; Hei-Chia Wang (Int. J. Data Min. Bioinform., 2014)

Characterization and distribution of repetitive elements in association with genes in the human genome. - Kai-Chiang Liang; Joseph T. Tseng; Shaw-Jenq Tsai; Hsiao-Fang Sunny Sun (Comput. Biol. Chem., 2015)