A XML-Based Approach to Integrating Heterogeneous Yeast Genome Data. - Kei-Hoi Cheung; Deyun Pan; Andrew K. Smith; Michael R. Seringhaus; Shawn M. Douglas; Mark Gerstein (METMBS, 2004)

RNAi Development. - Mark Gerstein; Shawn M. Douglas (PLoS Comput. Biol., 2007)

Design and self-assembly of DNA into nanoscale 3D shapes. - Shawn M. Douglas; Hendrik Dietz; Tim Liedl; Björn Högberg; Franziska Graf; Adam H. Marblestone; Surat Teerapittayanon; Alejandro Vazquez; George M. Church; William M. Shih (SIGGRAPH Talks, 2009)